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New page: left|200px<br /><applet load="16vp" size="450" color="white" frame="true" align="right" spinBox="true" caption="16vp, resolution 2.1Å" /> '''CONSERVED CORE OF THE...
 
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[[Image:16vp.gif|left|200px]]<br /><applet load="16vp" size="450" color="white" frame="true" align="right" spinBox="true"
caption="16vp, resolution 2.1&Aring;" />
'''CONSERVED CORE OF THE HERPES SIMPLEX VIRUS TRANSCRIPTIONAL REGULATORY PROTEIN VP16'''<br />


==Overview==
==CONSERVED CORE OF THE HERPES SIMPLEX VIRUS TRANSCRIPTIONAL REGULATORY PROTEIN VP16==
On infection, the herpes simplex virus (HSV) virion protein VP16 (Vmw65;, alphaTIF) forms a transcriptional regulatory complex-the VP16-induced, complex-with two cellular proteins, HCF and Oct-1, on VP16-responsive, cis-regulatory elements in HSV immediate-early promoters called TAATGARAT., Comparison of different HSV VP16 sequences reveals a conserved core region, that is sufficient for VP16-induced complex formation. The crystal, structure of the VP16 core has been determined at 2.1 A resolution. The, results reveal a novel, seat-like protein structure. Together with the, activity of mutant VP16 proteins, the structure of free VP16 suggests that, it contains (1) a disordered carboxy-terminal region that associates with, HCF, Oct-1, and DNA in the VP16-induced complex, and (2) a structured, region involved in virion assembly and possessing a novel DNA-binding, surface that differentiates among TAATGARAT VP16-response elements.
<StructureSection load='16vp' size='340' side='right'caption='[[16vp]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[16vp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_alphaherpesvirus_1 Human alphaherpesvirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=16VP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=16VP FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=16vp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=16vp OCA], [https://pdbe.org/16vp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=16vp RCSB], [https://www.ebi.ac.uk/pdbsum/16vp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=16vp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/VP16_HHV11 VP16_HHV11] Transcriptional activator of immediate-early (IE) gene products (alpha genes). Acts as a key activator of lytic infection by initiating the lytic program through the assembly of the transcriptional regulatory VP16-induced complex composed of VP16 and two cellular factors, HCFC1 and POU2F 1. VP16-induced complex represents a regulatory switch: when it is on, it promotes IE-gene expression and thus lytic infection, and when it is off, it limits IE-gene transcription favoring latent infection.  May play a role in the aggregation of tegument proteins around nucleocapsids during virus morphogenesis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/6v/16vp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=16vp ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
On infection, the herpes simplex virus (HSV) virion protein VP16 (Vmw65; alphaTIF) forms a transcriptional regulatory complex-the VP16-induced complex-with two cellular proteins, HCF and Oct-1, on VP16-responsive cis-regulatory elements in HSV immediate-early promoters called TAATGARAT. Comparison of different HSV VP16 sequences reveals a conserved core region that is sufficient for VP16-induced complex formation. The crystal structure of the VP16 core has been determined at 2.1 A resolution. The results reveal a novel, seat-like protein structure. Together with the activity of mutant VP16 proteins, the structure of free VP16 suggests that it contains (1) a disordered carboxy-terminal region that associates with HCF, Oct-1, and DNA in the VP16-induced complex, and (2) a structured region involved in virion assembly and possessing a novel DNA-binding surface that differentiates among TAATGARAT VP16-response elements.


==About this Structure==
Crystal structure of the conserved core of the herpes simplex virus transcriptional regulatory protein VP16.,Liu Y, Gong W, Huang CC, Herr W, Cheng X Genes Dev. 1999 Jul 1;13(13):1692-703. PMID:10398682<ref>PMID:10398682</ref>
16VP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_6 Human herpesvirus 6] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=16VP OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Crystal structure of the conserved core of the herpes simplex virus transcriptional regulatory protein VP16., Liu Y, Gong W, Huang CC, Herr W, Cheng X, Genes Dev. 1999 Jul 1;13(13):1692-703. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10398682 10398682]
</div>
[[Category: Human herpesvirus 6]]
<div class="pdbe-citations 16vp" style="background-color:#fffaf0;"></div>
[[Category: Single protein]]
== References ==
[[Category: Cheng, X.]]
<references/>
[[Category: Gong, W.]]
__TOC__
[[Category: Herr, W.]]
</StructureSection>
[[Category: Huang, C.C.]]
[[Category: Human alphaherpesvirus 1]]
[[Category: Liu, Y.]]
[[Category: Large Structures]]
[[Category: SO4]]
[[Category: Cheng X]]
[[Category: transcriptional regulatory protein]]
[[Category: Gong W]]
 
[[Category: Herr W]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 10:29:21 2007''
[[Category: Huang CC]]
[[Category: Liu Y]]
Retrieved from "https://proteopedia.org/16vp"