2riu: Difference between revisions

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[[Image:2riu.jpg|left|200px]]


<!--
==Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase- alternate interpreation==
The line below this paragraph, containing "STRUCTURE_2riu", creates the "Structure Box" on the page.
<StructureSection load='2riu' size='340' side='right'caption='[[2riu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2riu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_albicans Candida albicans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RIU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RIU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5RP:RIBULOSE-5-PHOSPHATE'>5RP</scene></td></tr>
{{STRUCTURE_2riu|  PDB=2riu  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2riu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2riu OCA], [https://pdbe.org/2riu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2riu RCSB], [https://www.ebi.ac.uk/pdbsum/2riu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2riu ProSAT]</span></td></tr>
 
</table>
'''Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase- alternate interpreation'''
== Function ==
 
[https://www.uniprot.org/uniprot/RIB3_CANAL RIB3_CANAL] Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity).[HAMAP-Rule:MF_00180]
 
== Evolutionary Conservation ==
==Overview==
[[Image:Consurf_key_small.gif|200px|right]]
Reinterpretation of the space-group symmetry is reported for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase (PDB codes 1tks and 1tku). The two structures reported in space group P1 with a dimer in the asymmetric unit can be described as C-centered monoclinic structures with one subunit in the asymmetric unit.
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ri/2riu_consurf.spt"</scriptWhenChecked>
2RIU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Candida_albicans Candida albicans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RIU OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==Reference==
  </jmolCheckbox>
Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase., Le Trong I, Stenkamp RE, Acta Crystallogr D Biol Crystallogr. 2008 Feb;64(Pt 2):219-20. Epub 2008, Jan 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18219123 18219123]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2riu ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Candida albicans]]
[[Category: Candida albicans]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Stenkamp, R E.]]
[[Category: Le Trong I]]
[[Category: Trong, I Le.]]
[[Category: Stenkamp RE]]
[[Category: Alternate model]]
[[Category: Isomerase]]
[[Category: Magnesium]]
[[Category: Manganese]]
[[Category: Metal-binding]]
[[Category: Riboflavin biosynthesis]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 16:59:38 2008''

Latest revision as of 09:22, 21 February 2024

Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase- alternate interpreation

2riu, resolution 1.70Å

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