2ywi: Difference between revisions

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~~[[Image:2ywi.jpg|left|200px]]~~

~~<!--~~

==Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus==

~~The line below this paragraph, containing "STRUCTURE_2ywi", creates the "Structure Box" on the page.~~

~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~

== Structural highlights ==

~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~

<table><tr><td colspan='2'>[[2ywi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YWI FirstGlance]. <br>

~~or leave the SCENE parameter empty for the default display.~~

</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>

~~-->~~

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2ywi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywi OCA], [http://pdbe.org/2ywi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ywi RCSB], [http://www.ebi.ac.uk/pdbsum/2ywi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywi ProSAT], [http://www.topsan.org/Proteins/RSGI/2ywi TOPSAN]</span></td></tr>

~~{{STRUCTURE_2ywi| PDB~~=~~2ywi | SCENE~~= }}

</table>

== Evolutionary Conservation ==

~~'''~~Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus'''

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

==~~About this Structure~~==

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywi_consurf.spt"</scriptWhenChecked>

~~2YWI is a~~ [[~~Single protein~~]] structure of sequence from [http://en.wikipedia.org/wiki/~~Geobacillus_kaustophilus Geobacillus kaustophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWI OCA].

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

[[Category: ~~Geobacillus kaustophilus~~]]

<text>to colour the structure by Evolutionary Conservation</text>

[[Category: ~~Single protein~~]]

</jmolCheckbox>

[[Category: Ebihara, A.]]

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywi ConSurf].

[[Category: Kuramitsu, S.]]

[[Category: Manzoku, M.]]

__TOC__

[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]

</StructureSection>

[[Category: Yokoyama, S.]]

[[Category: Geoka]]

[[Category: Large Structures]]

[[Category: Ebihara, A]]

[[Category: Kuramitsu, S]]

[[Category: Manzoku, M]]

[[Category: Structural genomic]]

[[Category: Yokoyama, S]]

[[Category: National project on protein structural and functional analyse]]

[[Category: Nppsfa]]

~~[[Category: Riken structural genomics/proteomics initiative]]~~

[[Category: Rsgi]]

~~[[Category: Structural genomic]]~~

[[Category: Uncharacterized conserved protein]]

[[Category: Unknown function]]

~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 19:35:36 2008''~~

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@@ Line 1: / Line 1: @@
-[[Image:2ywi.jpg|left|200px]]
-<!--
+==Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus==
-The line below this paragraph, containing "STRUCTURE_2ywi", creates the "Structure Box" on the page.
+<StructureSection load='2ywi' size='340' side='right'caption='[[2ywi]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ywi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YWI FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2ywi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywi OCA], [http://pdbe.org/2ywi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ywi RCSB], [http://www.ebi.ac.uk/pdbsum/2ywi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywi ProSAT], [http://www.topsan.org/Proteins/RSGI/2ywi TOPSAN]</span></td></tr>
-{{STRUCTURE_2ywi|  PDB=2ywi  |  SCENE=  }}
+</table>
+== Evolutionary Conservation ==
-'''Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywi_consurf.spt"</scriptWhenChecked>
-YWI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWI OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Geobacillus kaustophilus]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Single protein]]
+  </jmolCheckbox>
-[[Category: Ebihara, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywi ConSurf].
-[[Category: Kuramitsu, S.]]
+<div style="clear:both"></div>
-[[Category: Manzoku, M.]]
+__TOC__
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+</StructureSection>
-[[Category: Yokoyama, S.]]
+[[Category: Geoka]]
+[[Category: Large Structures]]
+[[Category: Ebihara, A]]
+[[Category: Kuramitsu, S]]
+[[Category: Manzoku, M]]
+[[Category: Structural genomic]]
+[[Category: Yokoyama, S]]
 [[Category: National project on protein structural and functional analyse]]
 [[Category: Nppsfa]]
-[[Category: Riken structural genomics/proteomics initiative]]
 [[Category: Rsgi]]
-[[Category: Structural genomic]]
 [[Category: Uncharacterized conserved protein]]
 [[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 19:35:36 2008''