2yys: Difference between revisions

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[[Image:2yys.jpg|left|200px]]


<!--
==Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_2yys", creates the "Structure Box" on the page.
<StructureSection load='2yys' size='340' side='right'caption='[[2yys]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2yys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_2yys|  PDB=2yys  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yys OCA], [https://pdbe.org/2yys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yys RCSB], [https://www.ebi.ac.uk/pdbsum/2yys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yys ProSAT]</span></td></tr>
 
</table>
'''Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SHC1_THET8 Q5SHC1_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2YYS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yys_consurf.spt"</scriptWhenChecked>
Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8., Okai M, Miyauchi Y, Ebihara A, Lee WC, Nagata K, Tanokura M, Proteins. 2008 Mar;70(4):1646-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18175319 18175319]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Thermus thermophilus]]
  </jmolCheckbox>
[[Category: Ebihara, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yys ConSurf].
[[Category: Lee, W C.]]
<div style="clear:both"></div>
[[Category: Miyauchi, Y.]]
__TOC__
[[Category: Nagata, K.]]
</StructureSection>
[[Category: Okai, M.]]
[[Category: Large Structures]]
[[Category: Tanokura, M.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Crystal structure]]
[[Category: Ebihara A]]
[[Category: Proline iminopeptidase-related protein]]
[[Category: Lee WC]]
[[Category: Structural genomic]]
[[Category: Miyauchi Y]]
[[Category: Ttha1809]]
[[Category: Nagata K]]
[[Category: Unknown function]]
[[Category: Okai M]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 19:42:20 2008''
[[Category: Tanokura M]]
Retrieved from "https://proteopedia.org/2yys"