3b6n: Difference between revisions

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[[Image:3b6n.gif|left|200px]]


<!--
==Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PV003920 from Plasmodium vivax==
The line below this paragraph, containing "STRUCTURE_3b6n", creates the "Structure Box" on the page.
<StructureSection load='3b6n' size='340' side='right'caption='[[3b6n]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3b6n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax_Sal-1 Plasmodium vivax Sal-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B6N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B6N FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.26&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3b6n|  PDB=3b6n  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b6n OCA], [https://pdbe.org/3b6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b6n RCSB], [https://www.ebi.ac.uk/pdbsum/3b6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b6n ProSAT]</span></td></tr>
 
</table>
'''Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PV003920 from Plasmodium vivax'''
== Function ==
 
[https://www.uniprot.org/uniprot/A5KBP6_PLAVS A5KBP6_PLAVS]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3B6N is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Eukaryota Eukaryota]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B6N OCA].  
Check<jmol>
[[Category: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase]]
  <jmolCheckbox>
[[Category: Eukaryota]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b6/3b6n_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Arrowsmith, C H.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Artz, J D.]]
  </jmolCheckbox>
[[Category: Bochkarev, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b6n ConSurf].
[[Category: Edwards, A M.]]
<div style="clear:both"></div>
[[Category: Hui, R.]]
__TOC__
[[Category: Khuu, C.]]
</StructureSection>
[[Category: Kozieradzki, I.]]
[[Category: Large Structures]]
[[Category: Lew, J.]]
[[Category: Plasmodium vivax Sal-1]]
[[Category: Lin, Y H.]]
[[Category: Arrowsmith CH]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Artz JD]]
[[Category: Schapira, M.]]
[[Category: Bochkarev A]]
[[Category: Sun, X.]]
[[Category: Edwards AM]]
[[Category: Weigelt, J.]]
[[Category: Hui R]]
[[Category: Wernimont, A K.]]
[[Category: Khuu C]]
[[Category: Xiao, T.]]
[[Category: Kozieradzki I]]
[[Category: Zhao, Y.]]
[[Category: Lew J]]
[[Category: Isoprene biosynthesis]]
[[Category: Lin YH]]
[[Category: Lyase]]
[[Category: Schapira M]]
[[Category: Malaria isoprenoid biosynthesis and prenylation pathways ispf]]
[[Category: Sun X]]
[[Category: Sgc]]
[[Category: Weigelt J]]
[[Category: Structural genomic]]
[[Category: Wernimont AK]]
[[Category: Structural genomics consortium]]
[[Category: Xiao T]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 20:26:45 2008''
[[Category: Zhao Y]]

Latest revision as of 12:02, 30 August 2023

Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PV003920 from Plasmodium vivax

3b6n, resolution 2.26Å

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