3c8d: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3c8d.jpg|left|200px]]


<!--
==Crystal structure of the enterobactin esterase FES from Shigella flexneri in the presence of 2,3-Di-hydroxy-N-benzoyl-glycine==
The line below this paragraph, containing "STRUCTURE_3c8d", creates the "Structure Box" on the page.
<StructureSection load='3c8d' size='340' side='right'caption='[[3c8d]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3c8d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C8D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
{{STRUCTURE_3c8d|  PDB=3c8d  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c8d OCA], [https://pdbe.org/3c8d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c8d RCSB], [https://www.ebi.ac.uk/pdbsum/3c8d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c8d ProSAT], [https://www.topsan.org/Proteins/MCSG/3c8d TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of the enterobactin esterase IroD from Shigella flexneri in the presence of 2,3-Di-hydroxy-N-benzoyl-glycine'''
== Function ==
 
[https://www.uniprot.org/uniprot/A0A0H2VTI6_SHIFL A0A0H2VTI6_SHIFL]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3C8D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457t Shigella flexneri 2a str. 2457t]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8D OCA].  
Check<jmol>
[[Category: Shigella flexneri 2a str. 2457t]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c8d_consurf.spt"</scriptWhenChecked>
[[Category: Abergel, R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Holzle, D.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: Kim, Y.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c8d ConSurf].
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Maltseva, N.]]
__TOC__
[[Category: Raymond, K.]]
</StructureSection>
[[Category: Alpha-beta-alpha sandwich]]
[[Category: Large Structures]]
[[Category: Hydrolase]]
[[Category: Shigella flexneri 2a str. 2457T]]
[[Category: Irod]]
[[Category: Abergel R]]
[[Category: Iron aquisition]]
[[Category: Holzle D]]
[[Category: Mcsg]]
[[Category: Joachimiak A]]
[[Category: Midwest center for structural genomic]]
[[Category: Kim Y]]
[[Category: Protein structure initiative]]
[[Category: Maltseva N]]
[[Category: Psi-2]]
[[Category: Raymond K]]
[[Category: Structural genomic]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 21:26:53 2008''
Retrieved from "https://proteopedia.org/3c8d"