2k3a: Difference between revisions

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[[Image:2k3a.jpg|left|200px]]


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==NMR solution structure of Staphylococcus saprophyticus CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain protein. Northeast Structural Genomics Consortium target SyR11==
The line below this paragraph, containing "STRUCTURE_2k3a", creates the "Structure Box" on the page.
<StructureSection load='2k3a' size='340' side='right'caption='[[2k3a]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2k3a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305_=_NCTC_7292 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2jrn 2jrn]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K3A FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k3a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k3a OCA], [https://pdbe.org/2k3a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k3a RCSB], [https://www.ebi.ac.uk/pdbsum/2k3a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k3a ProSAT], [https://www.topsan.org/Proteins/NESGC/2k3a TOPSAN]</span></td></tr>
{{STRUCTURE_2k3a|  PDB=2k3a  |  SCENE= }}
</table>
 
== Function ==
'''NMR solution structure of Staphylococcus saprophyticus CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain protein. Northeast Structural Genomics Consortium target SyR11'''
[https://www.uniprot.org/uniprot/Q49ZM2_STAS1 Q49ZM2_STAS1]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2K3A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_saprophyticus_subsp._saprophyticus Staphylococcus saprophyticus subsp. saprophyticus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2jrn 2jrn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3A OCA].  
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/2k3a_consurf.spt"</scriptWhenChecked>
[[Category: Staphylococcus saprophyticus subsp. saprophyticus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Aramini, J M.]]
  </jmolCheckbox>
[[Category: Baran, M C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k3a ConSurf].
[[Category: Chen, C X.]]
<div style="clear:both"></div>
[[Category: Cunningham, K C.]]
__TOC__
[[Category: Liu, J.]]
</StructureSection>
[[Category: Montelione, G T.]]
[[Category: Large Structures]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]]
[[Category: Nwosu, C.]]
[[Category: Acton TB]]
[[Category: Owens, L.]]
[[Category: Aramini JM]]
[[Category: Rossi, P.]]
[[Category: Baran MC]]
[[Category: Rost, B.]]
[[Category: Chen CX]]
[[Category: Swapna, G.]]
[[Category: Cunningham KC]]
[[Category: Xiao, R.]]
[[Category: Liu J]]
[[Category: Chap domain]]
[[Category: Montelione GT]]
[[Category: Hydrolase antigen]]
[[Category: Nwosu C]]
[[Category: Monomer]]
[[Category: Owens LA]]
[[Category: Nesg]]
[[Category: Rossi P]]
[[Category: Northeast structural genomics consortium]]
[[Category: Rost B]]
[[Category: Protein]]
[[Category: Swapna G]]
[[Category: Protein structure initiative]]
[[Category: Xiao R]]
[[Category: Psi-2]]
[[Category: Putative amidase]]
[[Category: Structural genomic]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 14 11:20:30 2008''