2r2y: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px <!-- The line below this paragraph, containing "STRUCTURE_2r2y", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...
 
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2r2y.jpg|left|200px]]


<!--
==Crystal structure of the proteasomal Rpn13 PRU-domain==
The line below this paragraph, containing "STRUCTURE_2r2y", creates the "Structure Box" on the page.
<StructureSection load='2r2y' size='340' side='right'caption='[[2r2y]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2r2y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R2Y FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r2y OCA], [https://pdbe.org/2r2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r2y RCSB], [https://www.ebi.ac.uk/pdbsum/2r2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r2y ProSAT]</span></td></tr>
{{STRUCTURE_2r2y|  PDB=2r2y  |  SCENE= }}
</table>
 
== Function ==
'''Crystal structure of the proteasomal Rpn 13 PRU-domain'''
[https://www.uniprot.org/uniprot/ADRM1_MOUSE ADRM1_MOUSE] Functions as a proteasomal ubiquitin receptor. Recruits the deubiquitinating enzyme UCHL5 at the 26S proteasome and promotes its activity.<ref>PMID:15819879</ref> <ref>PMID:18497827</ref>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2R2Y is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2Y OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r2/2r2y_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r2y ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Dikic I]]
[[Category: Dikic, I.]]
[[Category: Finley D]]
[[Category: Finley, D.]]
[[Category: Groll M]]
[[Category: Groll, M.]]
[[Category: Walters K]]
[[Category: Walters, K.]]
[[Category: 19s regulator]]
[[Category: Ph-domain]]
[[Category: Proteasome]]
[[Category: Receptor]]
[[Category: Receptor domain for ubiquitin and proteasome binding]]
[[Category: Ubiquitin]]
[[Category: Ubiquitin-proteasome-degradation pathway]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 14 11:22:40 2008''

Latest revision as of 09:19, 21 February 2024

Crystal structure of the proteasomal Rpn13 PRU-domain

2r2y, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA