2zab: Difference between revisions
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==Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Cmplex with Product (GGG)== | |||
<StructureSection load='2zab' size='340' side='right' caption='[[2zab]], [[Resolution|resolution]] 1.66Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2zab]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingomonas_sp._a1 Sphingomonas sp. a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZAB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZAB FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=BEM:BETA-D-MANNURONIC+ACID'>BEM</scene>, <scene name='pdbligand=LGU:ALPHA-L-GULURONATE'>LGU</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cws|2cws]], [[2z42|2z42]], [[2za9|2za9]], [[2zaa|2zaa]], [[2zac|2zac]]</td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aly ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Poly(beta-D-mannuronate)_lyase Poly(beta-D-mannuronate) lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.3 4.2.2.3] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zab OCA], [http://pdbe.org/2zab PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zab RCSB], [http://www.ebi.ac.uk/pdbsum/2zab PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
== | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/za/2zab_consurf.spt"</scriptWhenChecked> | |||
[[ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zab ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Sphingomonas sp. a1]] | [[Category: Sphingomonas sp. a1]] | ||
[[Category: Hashimoto, W | [[Category: Hashimoto, W]] | ||
[[Category: Mikami, B | [[Category: Mikami, B]] | ||
[[Category: Murata, K | [[Category: Murata, K]] | ||
[[Category: Ogura, K | [[Category: Ogura, K]] | ||
[[Category: Yamasaki, M | [[Category: Yamasaki, M]] | ||
[[Category: Alginate lyase]] | [[Category: Alginate lyase]] | ||
[[Category: Complex]] | [[Category: Complex]] | ||
[[Category: Lyase]] | |||
[[Category: Polysaccharide lyase family 7]] | [[Category: Polysaccharide lyase family 7]] | ||
[[Category: Y284f]] | [[Category: Y284f]] | ||
Latest revision as of 01:26, 10 February 2016
Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Cmplex with Product (GGG)
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