3cym: Difference between revisions

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<!--
==Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis==
The line below this paragraph, containing "STRUCTURE_3cym", creates the "Structure Box" on the page.
<StructureSection load='3cym' size='340' side='right'caption='[[3cym]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cym]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_ATCC_15703 Bifidobacterium adolescentis ATCC 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CYM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3cym|  PDB=3cym  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cym OCA], [https://pdbe.org/3cym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cym RCSB], [https://www.ebi.ac.uk/pdbsum/3cym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cym ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cym TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis'''
== Function ==
 
[https://www.uniprot.org/uniprot/A1A237_BIFAA A1A237_BIFAA]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CYM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_atcc_15703 Bifidobacterium adolescentis atcc 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYM OCA].  
Check<jmol>
[[Category: Bifidobacterium adolescentis atcc 15703]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/3cym_consurf.spt"</scriptWhenChecked>
[[Category: Almo, S C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bain, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: Chang, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cym ConSurf].
[[Category: Freeman, J.]]
<div style="clear:both"></div>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
__TOC__
[[Category: Ozyurt, S.]]
</StructureSection>
[[Category: Patskovsky, Y.]]
[[Category: Bifidobacterium adolescentis ATCC 15703]]
[[Category: Sauder, J M.]]
[[Category: Large Structures]]
[[Category: Wasserman, S R.]]
[[Category: Almo SC]]
[[Category: Exonuclease]]
[[Category: Bain K]]
[[Category: New york structural genomix research consortium]]
[[Category: Burley SK]]
[[Category: Nysgxrc]]
[[Category: Chang S]]
[[Category: Protein structure initiative]]
[[Category: Freeman J]]
[[Category: Psi-2]]
[[Category: Ozyurt S]]
[[Category: Ribonuclease d]]
[[Category: Patskovsky Y]]
[[Category: Structural genomic]]
[[Category: Sauder JM]]
[[Category: Uncharacterized protein]]
[[Category: Wasserman SR]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 28 09:24:31 2008''

Latest revision as of 09:39, 21 February 2024

Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis

3cym, resolution 2.10Å

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