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New page: left|200px<br /><applet load="1bg5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1bg5, resolution 2.60Å" /> '''CRYSTAL STRUCTURE OF...
 
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[[Image:1bg5.gif|left|200px]]<br /><applet load="1bg5" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1bg5, resolution 2.60&Aring;" />
'''CRYSTAL STRUCTURE OF THE ANKYRIN BINDING DOMAIN OF ALPHA-NA,K-ATPASE AS A FUSION PROTEIN WITH GLUTATHIONE S-TRANSFERASE'''<br />


==Overview==
==CRYSTAL STRUCTURE OF THE ANKYRIN BINDING DOMAIN OF ALPHA-NA,K-ATPASE AS A FUSION PROTEIN WITH GLUTATHIONE S-TRANSFERASE==
The ankyrin 33-residue repeating motif, an L-shaped structure with, protruding beta-hairpin tips, mediates specific macromolecular, interactions with cytoskeletal, membrane, and regulatory proteins. The, association between ankyrin and alpha-Na,K-ATPase, a ubiquitous membrane, protein critical to vectorial transport of ions and nutrients, is required, to assemble and stabilize Na,K-ATPase at the plasma membrane., alpha-Na,K-ATPase binds both red cell ankyrin (AnkR, a product of the ANK1, gene) and Madin-Darby canine kidney cell ankyrin (AnkG, a product of the, ANK3 gene) utilizing residues 142-166 (SYYQEAKSSKIMESFK NMVPQQALV) in its, second cytoplasmic domain. Fusion peptides of glutathione S-transferase, incorporating these 25 amino acids bind specifically to purified ankyrin, (Kd = 118 +/- 50 nM). The three-dimensional structure (2.6 A) of this, minimal ankyrin-binding motif, crystallized as the fusion protein, reveals, a 7-residue loop with one charged hydrophilic face capping a double, beta-strand. Comparison with ankyrin-binding sequences in p53, CD44, neurofascin/L1, and the inositol 1,4,5-trisphosphate receptor suggests, that the valency and specificity of ankyrin binding is achieved by the, interaction of 5-7-residue surface loops with the beta-hairpin tips of, multiple ankyrin repeat units.
<StructureSection load='1bg5' size='340' side='right'caption='[[1bg5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1bg5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BG5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BG5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bg5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bg5 OCA], [https://pdbe.org/1bg5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bg5 RCSB], [https://www.ebi.ac.uk/pdbsum/1bg5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bg5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GST26_SCHJA GST26_SCHJA] Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.  GST isoenzymes appear to play a central role in the parasite detoxification system. Other functions are also suspected including a role in increasing the solubility of haematin in the parasite gut.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/1bg5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bg5 ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The ankyrin 33-residue repeating motif, an L-shaped structure with protruding beta-hairpin tips, mediates specific macromolecular interactions with cytoskeletal, membrane, and regulatory proteins. The association between ankyrin and alpha-Na,K-ATPase, a ubiquitous membrane protein critical to vectorial transport of ions and nutrients, is required to assemble and stabilize Na,K-ATPase at the plasma membrane. alpha-Na,K-ATPase binds both red cell ankyrin (AnkR, a product of the ANK1 gene) and Madin-Darby canine kidney cell ankyrin (AnkG, a product of the ANK3 gene) utilizing residues 142-166 (SYYQEAKSSKIMESFK NMVPQQALV) in its second cytoplasmic domain. Fusion peptides of glutathione S-transferase incorporating these 25 amino acids bind specifically to purified ankyrin (Kd = 118 +/- 50 nM). The three-dimensional structure (2.6 A) of this minimal ankyrin-binding motif, crystallized as the fusion protein, reveals a 7-residue loop with one charged hydrophilic face capping a double beta-strand. Comparison with ankyrin-binding sequences in p53, CD44, neurofascin/L1, and the inositol 1,4,5-trisphosphate receptor suggests that the valency and specificity of ankyrin binding is achieved by the interaction of 5-7-residue surface loops with the beta-hairpin tips of multiple ankyrin repeat units.


==About this Structure==
Structure of the ankyrin-binding domain of alpha-Na,K-ATPase.,Zhang Z, Devarajan P, Dorfman AL, Morrow JS J Biol Chem. 1998 Jul 24;273(30):18681-4. PMID:9668035<ref>PMID:9668035</ref>
1BG5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1BG5 OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Structure of the ankyrin-binding domain of alpha-Na,K-ATPase., Zhang Z, Devarajan P, Dorfman AL, Morrow JS, J Biol Chem. 1998 Jul 24;273(30):18681-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9668035 9668035]
</div>
<div class="pdbe-citations 1bg5" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
[[Category: Single protein]]
[[Category: Devarajan P]]
[[Category: Devarajan, P.]]
[[Category: Morrow JS]]
[[Category: Morrow, J.S.]]
[[Category: Zhang Z]]
[[Category: Zhang, Z.]]
[[Category: ankyrin binding]]
[[Category: atpase]]
[[Category: carrier crystallization]]
[[Category: glutathione-s-transferase]]
[[Category: ion transport]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 11:37:25 2007''

Latest revision as of 11:01, 2 August 2023

CRYSTAL STRUCTURE OF THE ANKYRIN BINDING DOMAIN OF ALPHA-NA,K-ATPASE AS A FUSION PROTEIN WITH GLUTATHIONE S-TRANSFERASE

1bg5, resolution 2.60Å

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