3bl5: Difference between revisions

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==Crystal structure of QueC from Bacillus subtilis: an enzyme involved in preQ1 biosynthesis==
The line below this paragraph, containing "STRUCTURE_3bl5", creates the "Structure Box" on the page.
<StructureSection load='3bl5' size='340' side='right'caption='[[3bl5]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bl5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BL5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BL5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3bl5|  PDB=3bl5  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bl5 OCA], [https://pdbe.org/3bl5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bl5 RCSB], [https://www.ebi.ac.uk/pdbsum/3bl5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bl5 ProSAT]</span></td></tr>
 
</table>
'''Crystal structure of QueC from Bacillus subtilis: an enzyme involved in preQ1 biosynthesis'''
== Function ==
 
[https://www.uniprot.org/uniprot/QUEC_BACSU QUEC_BACSU] Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Uses ammonia as nitrogen donor.<ref>PMID:14660578</ref> <ref>PMID:19354300</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3BL5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BL5 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bl/3bl5_consurf.spt"</scriptWhenChecked>
Crystal structure of QueC from Bacillus subtilis: An enzyme involved in preQ(1) biosynthesis., Cicmil N, Huang RH, Proteins. 2008 May 19;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18491386 18491386]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bl5 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cicmil, N.]]
[[Category: Cicmil N]]
[[Category: Huang, R H.]]
[[Category: Huang RH]]
[[Category: Hydrolase]]
[[Category: Preq1 biosynthesis]]
[[Category: Queuosine biosynthesis]]
[[Category: Rna modification]]
[[Category: Trna]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun  4 09:54:06 2008''
Retrieved from "https://proteopedia.org/3bl5"