2jxi: Difference between revisions
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New page: '''Unreleased structure''' The entry 2jxi is ON HOLD until sometime in the future Authors: Halouska, S., Zhou, Y., Becker, D., Powers, R. Description: Solution structure of the DNA-bin... |
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==Solution structure of the DNA-binding domain of Pseudomonas putida Proline utilization A (putA) bound to GTTGCA DNA sequence== | |||
<StructureSection load='2jxi' size='340' side='right'caption='[[2jxi]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2jxi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JXI FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jxi OCA], [https://pdbe.org/2jxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jxi RCSB], [https://www.ebi.ac.uk/pdbsum/2jxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jxi ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q88D80_PSEPK Q88D80_PSEPK] Oxidizes proline to glutamate for use as a carbon and nitrogen source.[PIRNR:PIRNR000197] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jxi_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jxi ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Proline utilization A|Proline utilization A]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Pseudomonas putida]] | |||
[[Category: Synthetic construct]] | |||
[[Category: Becker D]] | |||
[[Category: Halouska S]] | |||
[[Category: Powers R]] | |||
[[Category: Zhou Y]] | |||
