2vrj: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: '''Unreleased structure''' The entry 2vrj is ON HOLD until Paper Publication Authors: Aguilar, M., Gloster, T.M., Garcia-Moreno, M.I., Ortiz Mellet, C., Davies, G.J., Llebaria, A., Casa...
 
OCA (talk | contribs)
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
'''Unreleased structure'''


The entry 2vrj is ON HOLD  until Paper Publication
==Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegine==
<StructureSection load='2vrj' size='340' side='right'caption='[[2vrj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2vrj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRJ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NCW:(1S,2R,3S,4R,5R)-2,3,4-TRIHYDROXY-N-OCTYL-6-OXA-8-AZABICYCLO[3.2.1]OCTANE-8-CARBOTHIOAMIDE'>NCW</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrj OCA], [https://pdbe.org/2vrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vrj RCSB], [https://www.ebi.ac.uk/pdbsum/2vrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BGLA_THEMA BGLA_THEMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/2vrj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vrj ConSurf].
<div style="clear:both"></div>


Authors: Aguilar, M., Gloster, T.M., Garcia-Moreno, M.I., Ortiz Mellet, C., Davies, G.J., Llebaria, A., Casas, J., Egido-Gabas, M., Garcia Fernandez, J.M.
==See Also==
 
*[[Beta-glucosidase|Beta-glucosidase]]
Description: Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5-deoxy-6-oxa-N-(thio)carbamoylcalystegine
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
 
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 11 08:54:55 2008''
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Aguilar M]]
[[Category: Casas J]]
[[Category: Davies GJ]]
[[Category: Egido-Gabas M]]
[[Category: Garcia Fernandez JM]]
[[Category: Garcia-Moreno MI]]
[[Category: Gloster TM]]
[[Category: Llebaria A]]
[[Category: Ortiz Mellet C]]