2gfp: Difference between revisions

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[[Image:2gfp.png|left|200px]]


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==Structure of the Multidrug Transporter EmrD from Escherichia coli==
The line below this paragraph, containing "STRUCTURE_2gfp", creates the "Structure Box" on the page.
<StructureSection load='2gfp' size='340' side='right'caption='[[2gfp]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2gfp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. The November 2007 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Multidrug Resistance Transporters''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2007_11 10.2210/rcsb_pdb/mom_2007_11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GFP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfp OCA], [https://pdbe.org/2gfp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gfp RCSB], [https://www.ebi.ac.uk/pdbsum/2gfp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfp ProSAT]</span></td></tr>
{{STRUCTURE_2gfp|  PDB=2gfp  |  SCENE= }}
</table>
 
== Function ==
'''Structure of the Multidrug Transporter EmrD from Escherichia coli'''
[https://www.uniprot.org/uniprot/EMRD_ECOLI EMRD_ECOLI] Multidrug resistance pump that participates in a low energy shock adaptative response.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
{{ABSTRACT_16675700}}
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gfp_consurf.spt"</scriptWhenChecked>
2GFP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFP OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gfp ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Chang, G.]]
[[Category: Multidrug Resistance Transporters]]
[[Category: He, X.]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Nguyen, T.]]
[[Category: Chang G]]
[[Category: Szewczyk, P.]]
[[Category: He X]]
[[Category: Yin, Y.]]
[[Category: Nguyen T]]
[[Category: Membrane protein]]
[[Category: Szewczyk P]]
[[Category: Multidrug transporter]]
[[Category: Yin Y]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 26 18:17:10 2008''
Retrieved from "https://proteopedia.org/2gfp"