1bn9: Difference between revisions

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[[Image:1bn9.png|left|200px]]


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==RESPONSE ELEMENT OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB BETA==
The line below this paragraph, containing "STRUCTURE_1bn9", creates the "Structure Box" on the page.
<StructureSection load='1bn9' size='340' side='right'caption='[[1bn9]]' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1bn9]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BN9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BN9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bn9 OCA], [https://pdbe.org/1bn9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bn9 RCSB], [https://www.ebi.ac.uk/pdbsum/1bn9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bn9 ProSAT]</span></td></tr>
{{STRUCTURE_1bn9|  PDB=1bn9  |  SCENE=  }}
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Rev-erb beta is an orphan receptor that binds as a homodimer or as a monomer to DNA. The solution structure of the non-palindromic 15 bp DNA duplex d(TAGAATGTAGGTCAG), the response element of Rev-erb beta for monomeric binding, was determined by 1H and 31P NMR, energy minimization with NMR-derived restraints for distances and NOE back-calculation methods. The refined final structures have the typical overall features of B-type DNA. However, titration of this 15 bp duplex with ReDBD, the DNA binding domain of Rev-erb beta, showed large shifts of imino protons and 31P signals, suggesting major conformational changes.


===RESPONSE ELEMENT OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB BETA===
Solution structure of the orphan nuclear receptor rev-erb beta response element by 1H, 31P NMR and molecular simulation*.,Castagne C, Terenzi H, Zakin MM, Delepierre M Biochimie. 2000 Aug;82(8):739-48. PMID:11018291<ref>PMID:11018291</ref>


 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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(as it appears on PubMed at http://www.pubmed.gov), where 11018291 is the PubMed ID number.
== References ==
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<references/>
{{ABSTRACT_PUBMED_11018291}}
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</StructureSection>
==About this Structure==
[[Category: Large Structures]]
Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BN9 OCA].
[[Category: Castagne C]]
 
[[Category: Delepierre M]]
==Reference==
[[Category: Terenzi H]]
Solution structure of the orphan nuclear receptor rev-erb beta response element by 1H, 31P NMR and molecular simulation*., Castagne C, Terenzi H, Zakin MM, Delepierre M, Biochimie. 2000 Aug;82(8):739-48. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11018291 11018291]
[[Category: Zakin MM]]
[[Category: Castagne, C.]]
[[Category: Delepierre, M.]]
[[Category: Terenzi, H.]]
[[Category: Zakin, M M.]]
[[Category: Dna]]
[[Category: Orphan nuclear receptor]]
[[Category: Response element]]
 
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