1bsd: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1bsd.png|left|200px]]


<!--
==CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE==
The line below this paragraph, containing "STRUCTURE_1bsd", creates the "Structure Box" on the page.
<StructureSection load='1bsd' size='340' side='right'caption='[[1bsd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1bsd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BSD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bsd OCA], [https://pdbe.org/1bsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bsd RCSB], [https://www.ebi.ac.uk/pdbsum/1bsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bsd ProSAT]</span></td></tr>
{{STRUCTURE_1bsd| PDB=1bsd |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RNBR_BACAM RNBR_BACAM] Hydrolyzes phosphodiester bonds in RNA, poly- and oligoribonucleotides resulting in 3'-nucleoside monophosphates via 2',3'-cyclophosphate intermediates.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bs/1bsd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bsd ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE===
==See Also==
 
*[[Barnase 3D structures|Barnase 3D structures]]
 
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
<!--
__TOC__
The line below this paragraph, {{ABSTRACT_PUBMED_8254677}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 8254677 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_8254677}}
 
==About this Structure==
1BSD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BSD OCA].
 
==Reference==
Crystal structural analysis of mutations in the hydrophobic cores of barnase., Buckle AM, Henrick K, Fersht AR, J Mol Biol. 1993 Dec 5;234(3):847-60. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8254677 8254677]
[[Category: Bacillus amyloliquefaciens]]
[[Category: Bacillus amyloliquefaciens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Buckle, A M.]]
[[Category: Buckle AM]]
[[Category: Fersht, A R.]]
[[Category: Fersht AR]]
[[Category: Henrick, K.]]
[[Category: Henrick K]]
[[Category: Endonuclease]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:38:56 2008''
Retrieved from "https://proteopedia.org/1bsd"