1d0i: Difference between revisions

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{{Seed}}
[[Image:1d0i.png|left|200px]]


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==CRYSTAL STRUCTURE OF TYPE II DEHYDROQUINASE FROM STREPTOMYCES COELICOLOR COMPLEXED WITH PHOSPHATE IONS==
The line below this paragraph, containing "STRUCTURE_1d0i", creates the "Structure Box" on the page.
<StructureSection load='1d0i' size='340' side='right'caption='[[1d0i]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1d0i]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D0I FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
{{STRUCTURE_1d0i| PDB=1d0i |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d0i OCA], [https://pdbe.org/1d0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d0i RCSB], [https://www.ebi.ac.uk/pdbsum/1d0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d0i ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/1d0i_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d0i ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF TYPE II DEHYDROQUINASE FROM STREPTOMYCES COELICOLOR COMPLEXED WITH PHOSPHATE IONS===
==See Also==
 
*[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11937054}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 11937054 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11937054}}
 
==About this Structure==
1D0I is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D0I OCA].
 
==Reference==
The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor., Roszak AW, Robinson DA, Krell T, Hunter IS, Fredrickson M, Abell C, Coggins JR, Lapthorn AJ, Structure. 2002 Apr;10(4):493-503. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11937054 11937054]
[[Category: 3-dehydroquinate dehydratase]]
[[Category: Single protein]]
[[Category: Streptomyces coelicolor]]
[[Category: Streptomyces coelicolor]]
[[Category: Coggins, J R.]]
[[Category: Coggins JR]]
[[Category: Hunter, I S.]]
[[Category: Hunter IS]]
[[Category: Krell, T.]]
[[Category: Krell T]]
[[Category: Lapthorn, A J.]]
[[Category: Lapthorn AJ]]
[[Category: Roszak, A W.]]
[[Category: Roszak AW]]
[[Category: Dodecameric quaternary structure]]
[[Category: Shikimate pathway]]
[[Category: Tetrahedral symmetry]]
[[Category: Type ii dehydroquinase]]
 
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Retrieved from "https://proteopedia.org/1d0i"