1div: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1div.png|left|200px]]


<!--
==RIBOSOMAL PROTEIN L9==
The line below this paragraph, containing "STRUCTURE_1div", creates the "Structure Box" on the page.
<StructureSection load='1div' size='340' side='right'caption='[[1div]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1div]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DIV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1div FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1div OCA], [https://pdbe.org/1div PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1div RCSB], [https://www.ebi.ac.uk/pdbsum/1div PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1div ProSAT]</span></td></tr>
{{STRUCTURE_1div|  PDB=1div |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RL9_GEOSE RL9_GEOSE] Binds to the 23S rRNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/1div_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1div ConSurf].
<div style="clear:both"></div>


===RIBOSOMAL PROTEIN L9===
==See Also==
 
*[[Ribosomal protein L9|Ribosomal protein L9]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_8306963}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 8306963 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_8306963}}
 
==About this Structure==
1DIV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIV OCA].
 
==Reference==
Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein., Hoffman DW, Davies C, Gerchman SE, Kycia JH, Porter SJ, White SW, Ramakrishnan V, EMBO J. 1994 Jan 1;13(1):205-12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8306963 8306963]
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cameron, C.]]
[[Category: Cameron C]]
[[Category: Davies, C.]]
[[Category: Davies C]]
[[Category: Gerchman, S E.]]
[[Category: Gerchman SE]]
[[Category: Hoffman, D W.]]
[[Category: Hoffman DW]]
[[Category: Kycia, J H.]]
[[Category: Kycia JH]]
[[Category: Porter, S.]]
[[Category: Porter S]]
[[Category: Ramakrishnan, V.]]
[[Category: Ramakrishnan V]]
[[Category: White, S W.]]
[[Category: White SW]]
[[Category: Ribosomal protein]]
[[Category: Rrna-binding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:08:01 2008''