1dzp: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1dzp.png|left|200px]]


<!--
==Porcine Odorant Binding Protein Complexed with diphenylmethanone==
The line below this paragraph, containing "STRUCTURE_1dzp", creates the "Structure Box" on the page.
<StructureSection load='1dzp' size='340' side='right'caption='[[1dzp]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dzp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DZP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BZQ:DIPHENYLMETHANONE'>BZQ</scene></td></tr>
{{STRUCTURE_1dzp| PDB=1dzp |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dzp OCA], [https://pdbe.org/1dzp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dzp RCSB], [https://www.ebi.ac.uk/pdbsum/1dzp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dzp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/OBP_PIG OBP_PIG] This protein is found in nasal epithelium and it binds a wide variety of chemical odorants.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/1dzp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dzp ConSurf].
<div style="clear:both"></div>


===PORCINE ODORANT BINDING PROTEIN COMPLEXED WITH DIPHENYLMETHANONE===
==See Also==
 
*[[Odorant binding protein 3D structures|Odorant binding protein 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_10864504}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 10864504 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_10864504}}
 
==About this Structure==
1DZP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZP OCA].
 
==Reference==
Complexes of porcine odorant binding protein with odorant molecules belonging to different chemical classes., Vincent F, Spinelli S, Ramoni R, Grolli S, Pelosi P, Cambillau C, Tegoni M, J Mol Biol. 2000 Jun 30;300(1):127-39. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10864504 10864504]
[[Category: Single protein]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Cambillau, C.]]
[[Category: Cambillau C]]
[[Category: Spinelli, S.]]
[[Category: Spinelli S]]
[[Category: Tegoni, M.]]
[[Category: Tegoni M]]
[[Category: Vincent, F.]]
[[Category: Vincent F]]
[[Category: Lipocalin]]
[[Category: Odorant binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:53:57 2008''
Retrieved from "https://proteopedia.org/1dzp"