1e0v: Difference between revisions

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{{Seed}}
[[Image:1e0v.png|left|200px]]


<!--
==Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A==
The line below this paragraph, containing "STRUCTURE_1e0v", creates the "Structure Box" on the page.
<StructureSection load='1e0v' size='340' side='right'caption='[[1e0v]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1e0v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_lividans Streptomyces lividans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E0V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E0V FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=G2F:2-DEOXY-2-FLUORO-ALPHA-D-GLUCOPYRANOSE'>G2F</scene>, <scene name='pdbligand=PRD_900050:2-deoxy-2-fluoro-beta-cellobiose'>PRD_900050</scene></td></tr>
{{STRUCTURE_1e0v|  PDB=1e0v  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e0v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e0v OCA], [https://pdbe.org/1e0v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e0v RCSB], [https://www.ebi.ac.uk/pdbsum/1e0v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e0v ProSAT]</span></td></tr>
 
</table>
===XYLANASE 10A FROM SREPTOMYCES LIVIDANS. CELLOBIOSYL-ENZYME INTERMEDIATE AT 1.7 A===
== Function ==
 
[https://www.uniprot.org/uniprot/XYNA_STRLI XYNA_STRLI] Contributes to hydrolyze hemicellulose, the major component of plant cell-walls. XLNA and XLNB seem to act sequentially on the substrate to yield xylobiose and xylose as carbon sources.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_10930426}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 10930426 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/1e0v_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_10930426}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1E0V is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_lividans Streptomyces lividans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E0V OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e0v ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Substrate specificity in glycoside hydrolase family 10. Structural and kinetic analysis of the Streptomyces lividans xylanase 10A., Ducros V, Charnock SJ, Derewenda U, Derewenda ZS, Dauter Z, Dupont C, Shareck F, Morosoli R, Kluepfel D, Davies GJ, J Biol Chem. 2000 Jul 28;275(30):23020-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10930426 10930426]
</StructureSection>
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Streptomyces lividans]]
[[Category: Streptomyces lividans]]
[[Category: Charnock, S J.]]
[[Category: Charnock SJ]]
[[Category: Dauter, Z.]]
[[Category: Dauter Z]]
[[Category: Davies, G J.]]
[[Category: Davies GJ]]
[[Category: Derewenda, U.]]
[[Category: Derewenda U]]
[[Category: Derewenda, Z S.]]
[[Category: Derewenda ZS]]
[[Category: Ducros, V.]]
[[Category: Ducros V]]
[[Category: Dupont, C.]]
[[Category: Dupont C]]
[[Category: Kluepfel, D.]]
[[Category: Kluepfel D]]
[[Category: Morosoli, R.]]
[[Category: Morosoli R]]
[[Category: Shareck, F.]]
[[Category: Shareck F]]
[[Category: Glycoside hydrolase family 10]]
[[Category: Glycosyl-enzyme intermediate]]
[[Category: Xylan degradation]]
[[Category: Xylanase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:57:23 2008''

Latest revision as of 09:56, 20 March 2024

Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A

1e0v, resolution 1.70Å

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