1fl6: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1fl6.png|left|200px]]


<!--
==THE HAPTEN COMPLEXED GERMLINE PRECURSOR TO SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4==
The line below this paragraph, containing "STRUCTURE_1fl6", creates the "Structure Box" on the page.
<StructureSection load='1fl6' size='340' side='right'caption='[[1fl6]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1fl6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FL6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FL6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AAH:1-[N-4-NITROBENZYL-N-4-CARBOXYBUTYLAMINO]METHYLPHOSPHONIC+ACID'>AAH</scene></td></tr>
{{STRUCTURE_1fl6|  PDB=1fl6 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fl6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fl6 OCA], [https://pdbe.org/1fl6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fl6 RCSB], [https://www.ebi.ac.uk/pdbsum/1fl6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fl6 ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fl/1fl6_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fl6 ConSurf].
<div style="clear:both"></div>


===THE HAPTEN COMPLEXED GERMLINE PRECURSOR TO SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4===
==See Also==
 
*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11535051}}, adds the Publication Abstract to the page
[[Category: Homo sapiens]]
(as it appears on PubMed at http://www.pubmed.gov), where 11535051 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Mus musculus]]
{{ABSTRACT_PUBMED_11535051}}
[[Category: Hanway D]]
 
[[Category: Mundorff EC]]
==About this Structure==
[[Category: Schultz PG]]
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FL6 OCA].
[[Category: Stevens RC]]
 
[[Category: Wendt KU]]
==Reference==
[[Category: Yang PL]]
A comparative analysis of the immunological evolution of antibody 28B4., Yin J, Mundorff EC, Yang PL, Wendt KU, Hanway D, Stevens RC, Schultz PG, Biochemistry. 2001 Sep 11;40(36):10764-73. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11535051 11535051]
[[Category: Yin J]]
[[Category: Hanway, D.]]
[[Category: Mundorff, E C.]]
[[Category: Schultz, P G.]]
[[Category: Stevens, R C.]]
[[Category: Wendt, K U.]]
[[Category: Yang, P L.]]
[[Category: Yin, J.]]
[[Category: Catalytic antibody]]
[[Category: Germline antibody]]
[[Category: Sulfide oxidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 03:25:47 2008''