1fps: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1fps.png|left|200px]]


<!--
==CRYSTAL STRUCTURE OF RECOMBINANT FARNESYL DIPHOSPHATE SYNTHASE AT 2.6 ANGSTROMS RESOLUTION==
The line below this paragraph, containing "STRUCTURE_1fps", creates the "Structure Box" on the page.
<StructureSection load='1fps' size='340' side='right'caption='[[1fps]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1fps]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FPS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fps OCA], [https://pdbe.org/1fps PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fps RCSB], [https://www.ebi.ac.uk/pdbsum/1fps PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fps ProSAT]</span></td></tr>
{{STRUCTURE_1fps| PDB=1fps |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/FPPS_CHICK FPPS_CHICK] Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fp/1fps_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fps ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF RECOMBINANT FARNESYL DIPHOSPHATE SYNTHASE AT 2.6 ANGSTROMS RESOLUTION===
==See Also==
 
*[[Farnesyl diphosphate synthase 3D structures|Farnesyl diphosphate synthase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_8086404}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 8086404 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_8086404}}
 
==About this Structure==
1FPS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FPS OCA].
 
==Reference==
Crystal structure of recombinant farnesyl diphosphate synthase at 2.6-A resolution., Tarshis LC, Yan M, Poulter CD, Sacchettini JC, Biochemistry. 1994 Sep 13;33(36):10871-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8086404 8086404]
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
[[Category: Geranyltranstransferase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Poulter CD]]
[[Category: Poulter, C D.]]
[[Category: Sacchettini JC]]
[[Category: Sacchettini, J C.]]
[[Category: Tarshis LC]]
[[Category: Tarshis, L C.]]
[[Category: Yan M]]
[[Category: Yan, M.]]
[[Category: Prenyltransferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 03:45:14 2008''