1gvp: Difference between revisions

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{{Seed}}
[[Image:1gvp.png|left|200px]]


<!--
==GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)==
The line below this paragraph, containing "STRUCTURE_1gvp", creates the "Structure Box" on the page.
<StructureSection load='1gvp' size='340' side='right'caption='[[1gvp]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1gvp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GVP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gvp OCA], [https://pdbe.org/1gvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gvp RCSB], [https://www.ebi.ac.uk/pdbsum/1gvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gvp ProSAT]</span></td></tr>
{{STRUCTURE_1gvp|  PDB=1gvp  |  SCENE=  }}
</table>
 
== Function ==
===GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)===
[https://www.uniprot.org/uniprot/G5P_BPF1 G5P_BPF1] Binds to DNA in a highly cooperative manner without pronounced sequence specificity. During synthesis of the single-stranded (progeny) viral DNA, prevents the conversion into the double-stranded replicative form. G5P is displaced by the capsid protein G8P during phage assembly on the inner bacterial membrane (By similarity).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_9098886}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 9098886 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/1gvp_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_9098886}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gvp ConSurf].
1GVP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GVP OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography., Su S, Gao YG, Zhang H, Terwilliger TC, Wang AH, Protein Sci. 1997 Apr;6(4):771-80. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9098886 9098886]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Gao, Y G.]]
[[Category: Gao Y-G]]
[[Category: Su, S.]]
[[Category: Su S]]
[[Category: Terwilliger, T C.]]
[[Category: Terwilliger TC]]
[[Category: Wang, A H.J.]]
[[Category: Wang AH-J]]
[[Category: Zhang, H.]]
[[Category: Zhang H]]
[[Category: Dna replication]]
[[Category: Dna-binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 06:09:49 2008''

Latest revision as of 07:26, 7 February 2024

GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)

1gvp, resolution 1.60Å

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