1hdi: Difference between revisions

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{{Seed}}
[[Image:1hdi.png|left|200px]]


<!--
==Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.==
The line below this paragraph, containing "STRUCTURE_1hdi", creates the "Structure Box" on the page.
<StructureSection load='1hdi' size='340' side='right'caption='[[1hdi]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1hdi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HDI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PG:3-PHOSPHOGLYCERIC+ACID'>3PG</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1hdi| PDB=1hdi |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hdi OCA], [https://pdbe.org/1hdi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hdi RCSB], [https://www.ebi.ac.uk/pdbsum/1hdi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hdi ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PGK1_PIG PGK1_PIG]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/1hdi_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hdi ConSurf].
<div style="clear:both"></div>


===PIG MUSCLE 3-PHOSPHOGLYCERATE KINASE COMPLEXED WITH 3-PG AND MGADP.===
==See Also==
 
*[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11178909}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 11178909 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_11178909}}
 
==About this Structure==
1HDI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HDI OCA].
 
==Reference==
A 1.8 A resolution structure of pig muscle 3-phosphoglycerate kinase with bound MgADP and 3-phosphoglycerate in open conformation: new insight into the role of the nucleotide in domain closure., Szilagyi AN, Ghosh M, Garman E, Vas M, J Mol Biol. 2001 Feb 23;306(3):499-511. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11178909 11178909]
[[Category: Phosphoglycerate kinase]]
[[Category: Single protein]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Garman, E.]]
[[Category: Garman E]]
[[Category: Ghosh, M.]]
[[Category: Ghosh M]]
[[Category: Szilagyi, A N.]]
[[Category: Szilagyi AN]]
[[Category: Vas, M.]]
[[Category: Vas M]]
[[Category: Glycolysis]]
[[Category: Kinase]]
[[Category: Phosphoglycerate]]
[[Category: Ternary complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 08:02:06 2008''

Latest revision as of 11:30, 27 March 2024

Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.

1hdi, resolution 1.80Å

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