1ibz: Difference between revisions

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{{Seed}}
[[Image:1ibz.png|left|200px]]


<!--
==RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA==
The line below this paragraph, containing "STRUCTURE_1ibz", creates the "Structure Box" on the page.
<StructureSection load='1ibz' size='340' side='right'caption='[[1ibz]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ibz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IBZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
{{STRUCTURE_1ibz|  PDB=1ibz  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ibz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ibz OCA], [https://pdbe.org/1ibz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ibz RCSB], [https://www.ebi.ac.uk/pdbsum/1ibz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ibz ProSAT]</span></td></tr>
 
</table>
===RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA===
== Function ==
 
[https://www.uniprot.org/uniprot/Q820S6_NITEU Q820S6_NITEU]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_11341832}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 11341832 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/1ibz_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_11341832}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1IBZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IBZ OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ibz ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of a novel red copper protein from Nitrosomonas europaea., Lieberman RL, Arciero DM, Hooper AB, Rosenzweig AC, Biochemistry. 2001 May 15;40(19):5674-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11341832 11341832]
</StructureSection>
[[Category: Large Structures]]
[[Category: Nitrosomonas europaea]]
[[Category: Nitrosomonas europaea]]
[[Category: Single protein]]
[[Category: Arciero DM]]
[[Category: Arciero, D M.]]
[[Category: Hooper AB]]
[[Category: Hooper, A B.]]
[[Category: Lieberman RL]]
[[Category: Lieberman, R L.]]
[[Category: Rosenzweig AC]]
[[Category: Rosenzweig, A C.]]
[[Category: Beta hairpin]]
[[Category: Cupredoxin]]
[[Category: Nitrosocyanin]]
[[Category: Nitrosomonas europaea]]
[[Category: Red copper]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 10:44:11 2008''
Retrieved from "https://proteopedia.org/1ibz"