1jly: Difference between revisions

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{{Seed}}
[[Image:1jly.png|left|200px]]


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==CRYSTAL STRUCTURE OF AMARANTHUS CAUDATUS AGGLUTININ==
The line below this paragraph, containing "STRUCTURE_1jly", creates the "Structure Box" on the page.
<StructureSection load='1jly' size='340' side='right'caption='[[1jly]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1jly]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amaranthus_caudatus Amaranthus caudatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JLY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JLY FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FOR:FORMYL+GROUP'>FOR</scene></td></tr>
{{STRUCTURE_1jly|  PDB=1jly  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jly OCA], [https://pdbe.org/1jly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jly RCSB], [https://www.ebi.ac.uk/pdbsum/1jly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jly ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q71QF2_AMACA Q71QF2_AMACA]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Amaranthus caudatus agglutinin contains a novel arrangement of four beta-trefoil domains. The sugar-binding site provides specificity for the carcinoma-associated T-antigen disaccharide even when 'masked' by other sugars.


===CRYSTAL STRUCTURE OF AMARANTHUS CAUDATUS AGGLUTININ===
Structure of benzyl T-antigen disaccharide bound to Amaranthus caudatus agglutinin.,Transue TR, Smith AK, Mo H, Goldstein IJ, Saper MA Nat Struct Biol. 1997 Oct;4(10):779-83. PMID:9334739<ref>PMID:9334739</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1jly" style="background-color:#fffaf0;"></div>


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==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_9334739}}, adds the Publication Abstract to the page
*[[Agglutinin 3D structures|Agglutinin 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 9334739 is the PubMed ID number.
== References ==
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<references/>
{{ABSTRACT_PUBMED_9334739}}
__TOC__
 
</StructureSection>
==About this Structure==
1JLY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Amaranthus_caudatus Amaranthus caudatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JLY OCA].
 
==Reference==
Structure of benzyl T-antigen disaccharide bound to Amaranthus caudatus agglutinin., Transue TR, Smith AK, Mo H, Goldstein IJ, Saper MA, Nat Struct Biol. 1997 Oct;4(10):779-83. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9334739 9334739]
[[Category: Amaranthus caudatus]]
[[Category: Amaranthus caudatus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Goldstein, I J.]]
[[Category: Goldstein IJ]]
[[Category: Mo, H.]]
[[Category: Mo H]]
[[Category: Saper, M A.]]
[[Category: Saper MA]]
[[Category: Smith, A K.]]
[[Category: Smith AK]]
[[Category: Transue, T R.]]
[[Category: Transue TR]]
[[Category: Agglutinin]]
[[Category: Bivalent]]
[[Category: Lectin]]
[[Category: T-disaccharide homodimer]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 20:27:05 2008''

Latest revision as of 22:04, 26 March 2025

CRYSTAL STRUCTURE OF AMARANTHUS CAUDATUS AGGLUTININ

1jly, resolution 2.20Å

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