1l7d: Difference between revisions

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{{Seed}}
[[Image:1l7d.png|left|200px]]


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==Crystal Structure of R. rubrum Transhydrogenase Domain I without Bound NAD(H)==
The line below this paragraph, containing "STRUCTURE_1l7d", creates the "Structure Box" on the page.
<StructureSection load='1l7d' size='340' side='right'caption='[[1l7d]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1l7d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L7D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L7D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l7d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l7d OCA], [https://pdbe.org/1l7d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l7d RCSB], [https://www.ebi.ac.uk/pdbsum/1l7d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l7d ProSAT]</span></td></tr>
{{STRUCTURE_1l7d|  PDB=1l7d |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/PNTAA_RHORT PNTAA_RHORT] The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.[UniProtKB:P07001]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l7/1l7d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1l7d ConSurf].
<div style="clear:both"></div>


===Crystal Structure of R. rubrum Transhydrogenase Domain I without Bound NAD(H)===
==See Also==
 
*[[NAD(P) transhydrogenase 3D structures|NAD(P) transhydrogenase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_12379117}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 12379117 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_12379117}}
 
==About this Structure==
1L7D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L7D OCA].
 
==Reference==
Crystal structures of transhydrogenase domain I with and without bound NADH., Prasad GS, Wahlberg M, Sridhar V, Sundaresan V, Yamaguchi M, Hatefi Y, Stout CD, Biochemistry. 2002 Oct 22;41(42):12745-54. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12379117 12379117]
[[Category: Rhodospirillum rubrum]]
[[Category: Rhodospirillum rubrum]]
[[Category: Single protein]]
[[Category: Hatefi Y]]
[[Category: Hatefi, Y.]]
[[Category: Prasad GS]]
[[Category: Prasad, G S.]]
[[Category: Sridhar V]]
[[Category: Sridhar, V.]]
[[Category: Stout CD]]
[[Category: Stout, C D.]]
[[Category: Wahlberg M]]
[[Category: Wahlberg, M.]]
[[Category: Yamaguchi M]]
[[Category: Yamaguchi, M.]]
[[Category: Transhydrogenase domain i]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 11:51:58 2008''

Latest revision as of 07:30, 14 February 2024

Crystal Structure of R. rubrum Transhydrogenase Domain I without Bound NAD(H)

1l7d, resolution 1.81Å

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