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{{Seed}}
[[Image:1lnz.png|left|200px]]


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==Structure of the Obg GTP-binding protein==
The line below this paragraph, containing "STRUCTURE_1lnz", creates the "Structure Box" on the page.
<StructureSection load='1lnz' size='340' side='right'caption='[[1lnz]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LNZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G4P:GUANOSINE-5,3-TETRAPHOSPHATE'>G4P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1lnz|  PDB=1lnz  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lnz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lnz OCA], [https://pdbe.org/1lnz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lnz RCSB], [https://www.ebi.ac.uk/pdbsum/1lnz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lnz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1lnz TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/1lnz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lnz ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The Obg nucleotide binding protein family has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to man. Members of the family contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain. Structural analysis of Bacillus subtilis Obg revealed respective domain architectures and how they are coupled through the putative switch elements of the C-terminal GTPase domain in apo and nucleotide-bound configurations. Biochemical analysis of bacterial and human Obg proteins combined with the structural observation of the ppGpp nucleotide within the Obg active sight suggest a potential role for ppGpp modulation of Obg function in B. subtilis.


===Structure of the Obg GTP-binding protein===
Structural and biochemical analysis of the Obg GTP binding protein.,Buglino J, Shen V, Hakimian P, Lima CD Structure. 2002 Nov;10(11):1581-92. PMID:12429099<ref>PMID:12429099</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1lnz" style="background-color:#fffaf0;"></div>


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==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_12429099}}, adds the Publication Abstract to the page
*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 12429099 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_12429099}}
__TOC__
 
</StructureSection>
==About this Structure==
[[Category: Large Structures]]
1LNZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNZ OCA].
[[Category: Buglino J]]
 
[[Category: Burley SK]]
==Reference==
[[Category: Hakimian P]]
Structural and biochemical analysis of the Obg GTP binding protein., Buglino J, Shen V, Hakimian P, Lima CD, Structure. 2002 Nov;10(11):1581-92. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12429099 12429099]
[[Category: Lima CD]]
[[Category: Bacillus subtilis]]
[[Category: Shen V]]
[[Category: Single protein]]
[[Category: Buglino, J.]]
[[Category: Burley, S K.]]
[[Category: Hakimian, P.]]
[[Category: Lima, C D.]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Shen, V.]]
[[Category: Gtpase]]
[[Category: Large g-protein]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Obg]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Sporulation]]
[[Category: Stress response]]
[[Category: Stringent factor]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 21:32:00 2008''

Latest revision as of 00:13, 21 November 2024

Structure of the Obg GTP-binding protein

1lnz, resolution 2.60Å

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