1lod: Difference between revisions

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{{Seed}}
[[Image:1lod.png|left|200px]]


<!--
==INTERACTION OF A LEGUME LECTIN WITH TWO COMPONENTS OF THE BACTERIAL CELL WALL==
The line below this paragraph, containing "STRUCTURE_1lod", creates the "Structure Box" on the page.
<StructureSection load='1lod' size='340' side='right'caption='[[1lod]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1lod]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Lathyrus_ochrus Lathyrus ochrus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LOD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MUR:MURAMIC+ACID'>MUR</scene></td></tr>
{{STRUCTURE_1lod|  PDB=1lod  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lod OCA], [https://pdbe.org/1lod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lod RCSB], [https://www.ebi.ac.uk/pdbsum/1lod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lod ProSAT]</span></td></tr>
 
</table>
===INTERACTION OF A LEGUME LECTIN WITH TWO COMPONENTS OF THE BACTERIAL CELL WALL===
== Function ==
 
[https://www.uniprot.org/uniprot/LECB_LATOC LECB_LATOC]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_8144527}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 8144527 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/1lod_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_8144527}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1LOD is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Lathyrus_ochrus Lathyrus ochrus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LOD OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lod ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Interaction of a legume lectin with two components of the bacterial cell wall. A crystallographic study., Bourne Y, Ayouba A, Rouge P, Cambillau C, J Biol Chem. 1994 Apr 1;269(13):9429-35. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8144527 8144527]
</StructureSection>
[[Category: Large Structures]]
[[Category: Lathyrus ochrus]]
[[Category: Lathyrus ochrus]]
[[Category: Protein complex]]
[[Category: Bourne Y]]
[[Category: Bourne, Y.]]
[[Category: Cambillau C]]
[[Category: Cambillau, C.]]
[[Category: Lectin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 21:34:57 2008''

Latest revision as of 07:34, 14 February 2024

INTERACTION OF A LEGUME LECTIN WITH TWO COMPONENTS OF THE BACTERIAL CELL WALL

1lod, resolution 2.05Å

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