1lrh: Difference between revisions

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{{Seed}}
[[Image:1lrh.png|left|200px]]


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==Crystal structure of auxin-binding protein 1 in complex with 1-naphthalene acetic acid==
The line below this paragraph, containing "STRUCTURE_1lrh", creates the "Structure Box" on the page.
<StructureSection load='1lrh' size='340' side='right'caption='[[1lrh]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1lrh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LRH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NLA:NAPHTHALEN-1-YL-ACETIC+ACID'>NLA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1lrh|  PDB=1lrh  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lrh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lrh OCA], [https://pdbe.org/1lrh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lrh RCSB], [https://www.ebi.ac.uk/pdbsum/1lrh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lrh ProSAT]</span></td></tr>
 
</table>
===Crystal structure of auxin-binding protein 1 in complex with 1-naphthalene acetic acid===
== Function ==
 
[https://www.uniprot.org/uniprot/ABP1_MAIZE ABP1_MAIZE] This is probably a receptor for the plant hormone auxin.
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12065401}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 12065401 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lr/1lrh_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12065401}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1LRH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LRH OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lrh ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of auxin-binding protein 1 in complex with auxin., Woo EJ, Marshall J, Bauly J, Chen JG, Venis M, Napier RM, Pickersgill RW, EMBO J. 2002 Jun 17;21(12):2877-85. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12065401 12065401]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Zea mays]]
[[Category: Zea mays]]
[[Category: Bauly, J.]]
[[Category: Bauly J]]
[[Category: Chen, J G.]]
[[Category: Chen J-G]]
[[Category: Marshall, J.]]
[[Category: Marshall J]]
[[Category: Napier, R M.]]
[[Category: Napier RM]]
[[Category: Pickersgill, R W.]]
[[Category: Pickersgill RW]]
[[Category: Venis, M.]]
[[Category: Venis M]]
[[Category: Woo, E J.]]
[[Category: Woo EJ]]
[[Category: Beta jellyroll]]
[[Category: Double stranded parallel beta helix]]
[[Category: Germin like protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 21:52:26 2008''

Latest revision as of 08:26, 10 April 2024

Crystal structure of auxin-binding protein 1 in complex with 1-naphthalene acetic acid

1lrh, resolution 1.90Å

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