1m5h: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1m5h.png|left|200px]]


<!--
==Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus==
The line below this paragraph, containing "STRUCTURE_1m5h", creates the "Structure Box" on the page.
<StructureSection load='1m5h' size='340' side='right'caption='[[1m5h]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1m5h]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M5H FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
{{STRUCTURE_1m5h|  PDB=1m5h  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m5h OCA], [https://pdbe.org/1m5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m5h RCSB], [https://www.ebi.ac.uk/pdbsum/1m5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m5h ProSAT]</span></td></tr>
 
</table>
===Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus===
== Function ==
 
[https://www.uniprot.org/uniprot/FTR_ARCFU FTR_ARCFU] Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT).<ref>PMID:8481089</ref>
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12192072}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 12192072 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m5/1m5h_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12192072}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1M5H is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5H OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m5h ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
Crystal structures and enzymatic properties of three formyltransferases from archaea: environmental adaptation and evolutionary relationship., Mamat B, Roth A, Grimm C, Ermler U, Tziatzios C, Schubert D, Thauer RK, Shima S, Protein Sci. 2002 Sep;11(9):2168-78. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12192072 12192072]
<references/>
__TOC__
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
[[Category: Formylmethanofuran--tetrahydromethanopterin N-formyltransferase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Ermler U]]
[[Category: Ermler, U.]]
[[Category: Grimm C]]
[[Category: Grimm, C.]]
[[Category: Mamat B]]
[[Category: Mamat, B.]]
[[Category: Roth A]]
[[Category: Roth, A.]]
[[Category: Schubert D]]
[[Category: Schubert, D.]]
[[Category: Shima S]]
[[Category: Shima, S.]]
[[Category: Thauer RK]]
[[Category: Thauer, R K.]]
[[Category: Tziatzios C]]
[[Category: Tziatzios, C.]]
[[Category: Alpha/beta sandwich]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 23:15:21 2008''

Latest revision as of 07:39, 14 February 2024

Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus

1m5h, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1m5h&oldid=4051244"