1m5x: Difference between revisions

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{{Seed}}
[[Image:1m5x.png|left|200px]]


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==Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate==
The line below this paragraph, containing "STRUCTURE_1m5x", creates the "Structure Box" on the page.
<StructureSection load='1m5x' size='340' side='right'caption='[[1m5x]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1m5x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Monomastix_sp._OKE-1 Monomastix sp. OKE-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M5X FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_1m5x|  PDB=1m5x |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m5x OCA], [https://pdbe.org/1m5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m5x RCSB], [https://www.ebi.ac.uk/pdbsum/1m5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m5x ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C0JWR6_MONSK C0JWR6_MONSK]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m5/1m5x_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m5x ConSurf].
<div style="clear:both"></div>


===Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate===
==See Also==
 
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_12758074}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 12758074 is the PubMed ID number.
[[Category: Monomastix sp. OKE-1]]
-->
[[Category: Chevalier B]]
{{ABSTRACT_PUBMED_12758074}}
[[Category: Lemieux C]]
 
[[Category: Monnat RJ]]
==About this Structure==
[[Category: Stoddard BL]]
1M5X is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Monomastix_sp. Monomastix sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5X OCA].
[[Category: Turmel M]]
 
==Reference==
Flexible DNA target site recognition by divergent homing endonuclease isoschizomers I-CreI and I-MsoI., Chevalier B, Turmel M, Lemieux C, Monnat RJ Jr, Stoddard BL, J Mol Biol. 2003 May 30;329(2):253-69. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12758074 12758074]
[[Category: Monomastix sp.]]
[[Category: Single protein]]
[[Category: Chevalier, B.]]
[[Category: Lemieux, C.]]
[[Category: Monnat, R J.]]
[[Category: Stoddard, B L.]]
[[Category: Turmel, M.]]
[[Category: Laglidadg]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 23:17:06 2008''

Latest revision as of 07:40, 14 February 2024

Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate

1m5x, resolution 2.25Å

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