1moj: Difference between revisions

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{{Seed}}
[[Image:1moj.png|left|200px]]


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==Crystal structure of an archaeal dps-homologue from Halobacterium salinarum==
The line below this paragraph, containing "STRUCTURE_1moj", creates the "Structure Box" on the page.
<StructureSection load='1moj' size='340' side='right'caption='[[1moj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1moj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MOJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_1moj| PDB=1moj |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1moj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1moj OCA], [https://pdbe.org/1moj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1moj RCSB], [https://www.ebi.ac.uk/pdbsum/1moj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1moj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPS_HALSA DPS_HALSA] Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mo/1moj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1moj ConSurf].
<div style="clear:both"></div>


===Crystal structure of an archaeal dps-homologue from Halobacterium salinarum===
==See Also==
 
*[[Ferritin 3D structures|Ferritin 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15365182}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15365182 is the PubMed ID number.
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{{ABSTRACT_PUBMED_15365182}}
 
==About this Structure==
1MOJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOJ OCA].
 
==Reference==
Iron-oxo clusters biomineralizing on protein surfaces: structural analysis of Halobacterium salinarum DpsA in its low- and high-iron states., Zeth K, Offermann S, Essen LO, Oesterhelt D, Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13780-5. Epub 2004 Sep 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15365182 15365182]
[[Category: Halobacterium salinarum]]
[[Category: Halobacterium salinarum]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Essen, L O.]]
[[Category: Essen LO]]
[[Category: Oesterhelt, D.]]
[[Category: Oesterhelt D]]
[[Category: Offermann, S.]]
[[Category: Offermann S]]
[[Category: Zeth, K.]]
[[Category: Zeth K]]
[[Category: Dp]]
[[Category: Ferritin]]
[[Category: Four-helix bundle]]
[[Category: Halophilic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 00:33:58 2008''
Retrieved from "https://proteopedia.org/1moj"