3d0f: Difference between revisions

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{{Seed}}
[[Image:3d0f.jpg|left|200px]]


<!--
==Structure of the BIG_1156.2 domain of putative penicillin-binding protein MrcA from Nitrosomonas europaea ATCC 19718==
The line below this paragraph, containing "STRUCTURE_3d0f", creates the "Structure Box" on the page.
<StructureSection load='3d0f' size='340' side='right'caption='[[3d0f]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d0f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea_ATCC_19718 Nitrosomonas europaea ATCC 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.64&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3d0f|  PDB=3d0f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0f OCA], [https://pdbe.org/3d0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0f RCSB], [https://www.ebi.ac.uk/pdbsum/3d0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0f ProSAT], [https://www.topsan.org/Proteins/MCSG/3d0f TOPSAN]</span></td></tr>
 
</table>
===Structure of the BIG_1156.2 domain of putative penicillin-binding protein MrcA from Nitrosomonas europaea ATCC 19718===
== Function ==
 
[https://www.uniprot.org/uniprot/Q81ZZ3_NITEU Q81ZZ3_NITEU]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3D0F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea_atcc_19718 Nitrosomonas europaea atcc 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0F OCA].  
Check<jmol>
[[Category: Nitrosomonas europaea atcc 19718]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0f_consurf.spt"</scriptWhenChecked>
[[Category: Clancy, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Cuff, M E.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0f ConSurf].
[[Category: Mulligan, R.]]
<div style="clear:both"></div>
[[Category: Big_1156 2]]
__TOC__
[[Category: Cell shape]]
</StructureSection>
[[Category: Cell wall biogenesis/degradation]]
[[Category: Large Structures]]
[[Category: Glycosyltransferase]]
[[Category: Nitrosomonas europaea ATCC 19718]]
[[Category: Mcsg]]
[[Category: Clancy S]]
[[Category: Midwest center for structural genomic]]
[[Category: Cuff ME]]
[[Category: Nitrosomonas europaea]]
[[Category: Joachimiak A]]
[[Category: Penicillin-binding 1]]
[[Category: Mulligan R]]
[[Category: Peptidoglycan synthesis]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Transmembrane]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 11:31:50 2008''
Retrieved from "https://proteopedia.org/3d0f"