3dci: Difference between revisions
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New page: '''Unreleased structure''' The entry 3dci is ON HOLD Authors: Cuff, M.E., Xu, X., Zheng, H., Binkowski, T.A., Edwards, A., Savchenko, A., Joachimiak, A., Midwest Center for Structural G... |
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The | ==The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58== | ||
<StructureSection load='3dci' size='340' side='right'caption='[[3dci]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3dci]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCI FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_L_2749, Atu3454 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dci OCA], [https://pdbe.org/3dci PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dci RCSB], [https://www.ebi.ac.uk/pdbsum/3dci PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dci ProSAT], [https://www.topsan.org/Proteins/MCSG/3dci TOPSAN]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dci_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dci ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Agrt5]] | |||
[[Category: Large Structures]] | |||
[[Category: Binkowski, T A]] | |||
[[Category: Cuff, M E]] | |||
[[Category: Edwards, A]] | |||
[[Category: Joachimiak, A]] | |||
[[Category: Structural genomic]] | |||
[[Category: Savchenko, A]] | |||
[[Category: Xu, X]] | |||
[[Category: Zheng, H]] | |||
[[Category: Agrobacterium tumefacien]] | |||
[[Category: Arylesterase]] | |||
[[Category: Hydrolase]] | |||
[[Category: Mcsg]] | |||
[[Category: PSI, Protein structure initiative]] | |||
[[Category: Sgnh_hydrolase subfamily]] | |||
Latest revision as of 08:00, 2 February 2022
The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58
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