3dme: Difference between revisions
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New page: '''Unreleased structure''' The entry 3dme is ON HOLD Authors: J. Seetharaman, Abashidze, M.,, Dongyan Wang, Haleema Janjua, Erica L. Foote, Rong Xiao, Jinfeng Liu, John K. Everett, Thom... |
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==Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141== | |||
<StructureSection load='3dme' size='340' side='right'caption='[[3dme]], [[Resolution|resolution]] 1.70Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3dme]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DME FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dme OCA], [https://pdbe.org/3dme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dme RCSB], [https://www.ebi.ac.uk/pdbsum/3dme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dme ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q7VU70_BORPE Q7VU70_BORPE] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/3dme_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dme ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bordetella pertussis]] | |||
[[Category: Large Structures]] | |||
[[Category: Abashidze M]] | |||
[[Category: Acton TB]] | |||
[[Category: Everett JK]] | |||
[[Category: Foote EL]] | |||
[[Category: Hunt JF]] | |||
[[Category: Janjua H]] | |||
[[Category: Liu J]] | |||
[[Category: Montelione GT]] | |||
[[Category: Rost B]] | |||
[[Category: Seetharaman J]] | |||
[[Category: Tong L]] | |||
[[Category: Wang D]] | |||
[[Category: Xiao R]] | |||
Latest revision as of 09:42, 21 February 2024
Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141
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