1bbt: Difference between revisions

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{{Seed}}
[[Image:1bbt.png|left|200px]]


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==METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS==
The line below this paragraph, containing "STRUCTURE_1bbt", creates the "Structure Box" on the page.
<StructureSection load='1bbt' size='340' side='right'caption='[[1bbt]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1bbt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Foot-and-mouth_disease_virus Foot-and-mouth disease virus]. The August 2001 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Poliovirus and Rhinovirus''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2001_8 10.2210/rcsb_pdb/mom_2001_8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BBT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BBT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bbt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bbt OCA], [https://pdbe.org/1bbt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bbt RCSB], [https://www.ebi.ac.uk/pdbsum/1bbt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bbt ProSAT]</span></td></tr>
{{STRUCTURE_1bbt|  PDB=1bbt |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q84771_FMDVO Q84771_FMDVO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/1bbt_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bbt ConSurf].
<div style="clear:both"></div>


===METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS===
==See Also==
 
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
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(as it appears on PubMed at http://www.pubmed.gov), where 8382928 is the PubMed ID number.
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{{ABSTRACT_PUBMED_8382928}}
 
==About this Structure==
1BBT is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Foot-and-mouth_disease_virus Foot-and-mouth disease virus]. Additional information on 1BBT is available in a page on [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb20_1.html Poliovirus and Rhinovirus] at the RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BBT OCA].
 
==Reference==
Methods used in the structure determination of foot-and-mouth disease virus., Fry E, Acharya R, Stuart D, Acta Crystallogr A. 1993 Jan 1;49 ( Pt 1):45-55. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8382928 8382928]
[[Category: Foot-and-mouth disease virus]]
[[Category: Foot-and-mouth disease virus]]
[[Category: Large Structures]]
[[Category: Poliovirus and Rhinovirus]]
[[Category: Poliovirus and Rhinovirus]]
[[Category: Protein complex]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Acharya, K R.]]
[[Category: Acharya KR]]
[[Category: Fry, E E.]]
[[Category: Fry EE]]
[[Category: Logan, D T.]]
[[Category: Logan DT]]
[[Category: Stuart, D I.]]
[[Category: Stuart DI]]
[[Category: Icosahedral virus]]
[[Category: Virus]]
 
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