3dc7: Difference between revisions

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'''Unreleased structure'''


The entry 3dc7 is ON HOLD  until Jul 29 2009
==Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.==
 
<StructureSection load='3dc7' size='340' side='right'caption='[[3dc7]], [[Resolution|resolution]] 2.12&Aring;' scene=''>
Authors: Kuzin, A.P., Abashidze, M., Vorobiev, S.M., Seetharaman, J., Zhao, L., Mao, L., Ciccosanti, C., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dc7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC7 FirstGlance]. <br>
Description: Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109. (CASP Target)
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 12:13:17 2008''
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc7 OCA], [https://pdbe.org/3dc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc7 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc7 ProSAT], [https://www.topsan.org/Proteins/NESGC/3dc7 TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc7_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc7 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Lactobacillus plantarum]]
[[Category: Large Structures]]
[[Category: Abashidze, M]]
[[Category: Acton, T B]]
[[Category: Baran, M C]]
[[Category: Ciccosanti, C]]
[[Category: Hunt, J F]]
[[Category: Kuzin, A P]]
[[Category: Mao, L]]
[[Category: Montelione, G T]]
[[Category: Structural genomic]]
[[Category: Nair, R]]
[[Category: Rost, B]]
[[Category: Seetharaman, J]]
[[Category: Tong, L]]
[[Category: Vorobiev, S M]]
[[Category: Xiao, R]]
[[Category: Zhao, L]]
[[Category: Nesg lpr109 x-ray lp_3323]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]
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