1jln: Difference between revisions
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New page: left|200px<br /><applet load="1jln" size="450" color="white" frame="true" align="right" spinBox="true" caption="1jln, resolution 1.81Å" /> '''Crystal structure of... |
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== | ==Crystal structure of the catalytic domain of protein tyrosine phosphatase PTP-SL/BR7== | ||
Protein tyrosine phosphatases PTP-SL and PTPBR7 are isoforms belonging to | <StructureSection load='1jln' size='340' side='right'caption='[[1jln]], [[Resolution|resolution]] 1.81Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1jln]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JLN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JLN FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jln OCA], [https://pdbe.org/1jln PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jln RCSB], [https://www.ebi.ac.uk/pdbsum/1jln PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jln ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PTPRR_MOUSE PTPRR_MOUSE] Sequesters mitogen-activated protein kinases (MAPKs) such as MAPK1, MAPK3 and MAPK14 in the cytoplasm in an inactive form. The MAPKs bind to a dephosphorylated kinase interacting motif, phosphorylation of which by the protein kinase A complex releases the MAPKs for activation and translocation into the nucleus. Isoform gamma may have a role in patterning and cellular proliferation of skeletal elements in the precartilaginous/cartilaginous skeleton.<ref>PMID:10949045</ref> <ref>PMID:10601328</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jl/1jln_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jln ConSurf]. | |||
<div style="clear:both"></div> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Protein tyrosine phosphatases PTP-SL and PTPBR7 are isoforms belonging to cytosolic membrane-associated and to receptor-like PTPs (RPTPs), respectively. They represent a new family of PTPs with a major role in activation and translocation of MAP kinases. Specifically, the complex formation between PTP-SL and ERK2 involves an unusual interaction leading to the phosphorylation of PTP-SL by ERK2 at Thr253 and the inactivating dephosphorylation of ERK2 by PTP-SL. This interaction is strictly dependent upon a kinase interaction motif (KIM) (residues 224-239) situated at the N terminus of the PTP-SL catalytic domain. We report the first crystal structure of the catalytic domain for a member of this family (PTP-SL, residues 254-549, identical with residues 361-656 of PTPBR7), providing an example of an RPTP with single cytoplasmic domain, which is monomeric, having an unhindered catalytic site. In addition to the characteristic PTP-core structure, PTP-SL has an N-terminal helix, possibly orienting the KIM motif upon interaction with the target ERK2. An unusual residue in the catalytically important WPD loop promotes formation of a hydrophobically and electrostatically stabilised clamp. This could induce increased rigidity to the WPD loop and therefore reduced catalytic activity, in agreement with our kinetic measurements. A docking model based on the PTP-SL structure suggests that, in the complex with ERK2, the phosphorylation of PTP-SL should be accomplished first. The subsequent dephosphorylation of ERK2 seems to be possible only if a conformational rearrangement of the two interacting partners takes place. | |||
Crystal structure of PTP-SL/PTPBR7 catalytic domain: implications for MAP kinase regulation.,Szedlacsek SE, Aricescu AR, Fulga TA, Renault L, Scheidig AJ J Mol Biol. 2001 Aug 17;311(3):557-68. PMID:11493009<ref>PMID:11493009</ref> | |||
== | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | |||
<div class="pdbe-citations 1jln" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Aricescu AR]] | |||
[[Category: Fulga TA]] | |||
[[Category: Aricescu | [[Category: Renault L]] | ||
[[Category: Fulga | [[Category: Scheidig AJ]] | ||
[[Category: Renault | [[Category: Szedlacsek SE]] | ||
[[Category: Scheidig | |||
[[Category: Szedlacsek | |||
Latest revision as of 08:42, 16 August 2023
Crystal structure of the catalytic domain of protein tyrosine phosphatase PTP-SL/BR7
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