1nij: Difference between revisions

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{{Seed}}
[[Image:1nij.png|left|200px]]


<!--
==YJIA PROTEIN==
The line below this paragraph, containing "STRUCTURE_1nij", creates the "Structure Box" on the page.
<StructureSection load='1nij' size='340' side='right'caption='[[1nij]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1nij]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NIJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nij OCA], [https://pdbe.org/1nij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nij RCSB], [https://www.ebi.ac.uk/pdbsum/1nij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nij ProSAT]</span></td></tr>
{{STRUCTURE_1nij|  PDB=1nij  |  SCENE= }}
</table>
 
== Function ==
===YJIA PROTEIN===
[https://www.uniprot.org/uniprot/YJIA_ECOLI YJIA_ECOLI] Binds GTP. May function as GTP-dependent regulator.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
1NIJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA].  
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/1nij_consurf.spt"</scriptWhenChecked>
==Reference==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
Crystal structure of the Escherichia coli YjiA protein suggests a GTP-dependent regulatory function., Khil PP, Obmolova G, Teplyakov A, Howard AJ, Gilliland GL, Camerini-Otero RD, Proteins. 2004 Feb 1;54(2):371-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14696199 14696199]
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nij ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Camerini-Otero, R D.]]
[[Category: Camerini-Otero RD]]
[[Category: Gilliland, G L.]]
[[Category: Gilliland GL]]
[[Category: Howard, A J.]]
[[Category: Howard AJ]]
[[Category: Khil, P P.]]
[[Category: Khil PP]]
[[Category: Obmolova, G.]]
[[Category: Obmolova G]]
[[Category: S2F, Structure 2.Function Project.]]
[[Category: Teplyakov A]]
[[Category: Teplyakov, A.]]
[[Category: Gtp binding]]
[[Category: P-loop protein]]
[[Category: S2f]]
[[Category: Structural genomic]]
[[Category: Structure 2 function project]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 14:00:38 2008''

Latest revision as of 07:57, 14 February 2024

YJIA PROTEIN

1nij, resolution 2.00Å

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