1yun: Difference between revisions

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{{Seed}}
[[Image:1yun.png|left|200px]]


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==Crystal Structure of Nicotinic Acid Mononucleotide Adenylyltransferase from Pseudomonas aeruginosa==
The line below this paragraph, containing "STRUCTURE_1yun", creates the "Structure Box" on the page.
<StructureSection load='1yun' size='340' side='right'caption='[[1yun]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yun]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YUN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YUN FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1yun|  PDB=1yun  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yun OCA], [https://pdbe.org/1yun PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yun RCSB], [https://www.ebi.ac.uk/pdbsum/1yun PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yun ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of Nicotinic Acid Mononucleotide Adenylyltransferase from Pseudomonas aeruginosa===
== Function ==
 
[https://www.uniprot.org/uniprot/NADD_PSEAE NADD_PSEAE] Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (By similarity).
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yu/1yun_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16009375}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1YUN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YUN OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yun ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of nicotinic acid mononucleotide adenylyltransferase from Pseudomonas aeruginosa in its Apo and substrate-complexed forms reveals a fully open conformation., Yoon HJ, Kim HL, Mikami B, Suh SW, J Mol Biol. 2005 Aug 12;351(2):258-65. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16009375 16009375]
</StructureSection>
[[Category: Nicotinate-nucleotide adenylyltransferase]]
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Single protein]]
[[Category: Kim HL]]
[[Category: Kim, H L.]]
[[Category: Mikami B]]
[[Category: Mikami, B.]]
[[Category: Suh SW]]
[[Category: Suh, S W.]]
[[Category: Yoon HJ]]
[[Category: Yoon, H J.]]
[[Category: Alpha/beta domain]]
 
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Retrieved from "https://proteopedia.org/1yun"