1y90: Difference between revisions

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{{Seed}}
[[Image:1y90.png|left|200px]]


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==HIV-1 Dis(Mal) Duplex Mn-Soaked==
The line below this paragraph, containing "STRUCTURE_1y90", creates the "Structure Box" on the page.
<StructureSection load='1y90' size='340' side='right'caption='[[1y90]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1y90]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y90 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y90 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.08&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5BU:5-BROMO-URIDINE-5-MONOPHOSPHATE'>5BU</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
{{STRUCTURE_1y90|  PDB=1y90  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y90 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y90 OCA], [https://pdbe.org/1y90 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y90 RCSB], [https://www.ebi.ac.uk/pdbsum/1y90 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y90 ProSAT]</span></td></tr>
 
</table>
===HIV-1 Dis(Mal) Duplex Mn-Soaked===
__TOC__
 
</StructureSection>
 
[[Category: Large Structures]]
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[[Category: Dumas P]]
The line below this paragraph, {{ABSTRACT_PUBMED_12736317}}, adds the Publication Abstract to the page
[[Category: Ennifar E]]
(as it appears on PubMed at http://www.pubmed.gov), where 12736317 is the PubMed ID number.
[[Category: Walter P]]
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{{ABSTRACT_PUBMED_12736317}}
 
==About this Structure==
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y90 OCA].  
 
==Reference==
A crystallographic study of the binding of 13 metal ions to two related RNA duplexes., Ennifar E, Walter P, Dumas P, Nucleic Acids Res. 2003 May 15;31(10):2671-82. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12736317 12736317]
 
The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges., Ennifar E, Yusupov M, Walter P, Marquet R, Ehresmann B, Ehresmann C, Dumas P, Structure. 1999 Nov 15;7(11):1439-49. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10574792 10574792]
[[Category: Dumas, P.]]
[[Category: Ennifar, E.]]
[[Category: Walter, P.]]
[[Category: Bulge]]
[[Category: Hiv-1]]
[[Category: Metal ion]]
[[Category: Rna]]
 
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Retrieved from "https://proteopedia.org/1y90"