2i5k: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2i5k.png|left|200px]]


<!--
==Crystal structure of Ugp1p==
The line below this paragraph, containing "STRUCTURE_2i5k", creates the "Structure Box" on the page.
<StructureSection load='2i5k' size='340' side='right'caption='[[2i5k]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2i5k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I5K FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i5k OCA], [https://pdbe.org/2i5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i5k RCSB], [https://www.ebi.ac.uk/pdbsum/2i5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i5k ProSAT]</span></td></tr>
{{STRUCTURE_2i5k|  PDB=2i5k  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of Ugp1p===
[https://www.uniprot.org/uniprot/UGPA1_YEAST UGPA1_YEAST] Plays a central role as a glucosyl donor in cellular metabolic pathways.<ref>PMID:7588797</ref>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_17010990}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 17010990 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i5k_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_17010990}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i5k ConSurf].
2I5K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5K OCA].  
<div style="clear:both"></div>
 
== References ==
==Reference==
<references/>
Structural basis for subunit assembly in UDP-glucose pyrophosphorylase from Saccharomyces cerevisiae., Roeben A, Plitzko JM, Korner R, Bottcher UM, Siegers K, Hayer-Hartl M, Bracher A, J Mol Biol. 2006 Dec 8;364(4):551-60. Epub 2006 Sep 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17010990 17010990]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Boettcher UMK]]
[[Category: UTP--glucose-1-phosphate uridylyltransferase]]
[[Category: Bracher A]]
[[Category: Boettcher, U M.K.]]
[[Category: Hayer-Hartl M]]
[[Category: Bracher, A.]]
[[Category: Koerner R]]
[[Category: Hayer-Hartl, M.]]
[[Category: Plitzko JM]]
[[Category: Koerner, R.]]
[[Category: Roeben A]]
[[Category: Plitzko, J M.]]
[[Category: Siegers K]]
[[Category: Roeben, A.]]
[[Category: Siegers, K.]]
[[Category: Left-handed beta-helix]]
[[Category: Sgc domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 19:27:35 2008''

Latest revision as of 08:41, 4 June 2025

Crystal structure of Ugp1p

2i5k, resolution 3.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2i5k&oldid=4343404"