2ag0: Difference between revisions

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{{Seed}}
[[Image:2ag0.png|left|200px]]


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==Crystal structure of Benzaldehyde lyase (BAL)- native==
The line below this paragraph, containing "STRUCTURE_2ag0", creates the "Structure Box" on the page.
<StructureSection load='2ag0' size='340' side='right'caption='[[2ag0]], [[Resolution|resolution]] 2.58&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ag0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AG0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.58&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
{{STRUCTURE_2ag0|  PDB=2ag0  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ag0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ag0 OCA], [https://pdbe.org/2ag0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ag0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ag0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ag0 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Benzaldehyde lyase (BAL)- native===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9F4L3_PSEFL Q9F4L3_PSEFL]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16302970}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16302970 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ag/2ag0_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16302970}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2AG0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AG0 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ag0 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structure and mechanism of the ThDP-dependent benzaldehyde lyase from Pseudomonas fluorescens., Mosbacher TG, Mueller M, Schulz GE, FEBS J. 2005 Dec;272(23):6067-76. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16302970 16302970]
</StructureSection>
[[Category: Benzoin aldolase]]
[[Category: Large Structures]]
[[Category: Pseudomonas fluorescens]]
[[Category: Pseudomonas fluorescens]]
[[Category: Single protein]]
[[Category: Mosbacher TG]]
[[Category: Mosbacher, T G.]]
[[Category: Mueller M]]
[[Category: Mueller, M.]]
[[Category: Schulz GE]]
[[Category: Schulz, G E.]]
[[Category: Tetramer]]
[[Category: Thdp dependent fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:22:40 2008''

Latest revision as of 13:41, 13 March 2024

Crystal structure of Benzaldehyde lyase (BAL)- native

2ag0, resolution 2.58Å

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