2pm9: Difference between revisions

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{{Seed}}
[[Image:2pm9.png|left|200px]]


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==Crystal structure of yeast Sec13/31 vertex element of the COPII vesicular coat==
The line below this paragraph, containing "STRUCTURE_2pm9", creates the "Structure Box" on the page.
<StructureSection load='2pm9' size='340' side='right'caption='[[2pm9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pm9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PM9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pm9 OCA], [https://pdbe.org/2pm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pm9 RCSB], [https://www.ebi.ac.uk/pdbsum/2pm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pm9 ProSAT]</span></td></tr>
{{STRUCTURE_2pm9|  PDB=2pm9  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of yeast Sec13/31 vertex element of the COPII vesicular coat===
[https://www.uniprot.org/uniprot/SEC31_YEAST SEC31_YEAST] Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.<ref>PMID:8548805</ref> <ref>PMID:8852839</ref> <ref>PMID:9190202</ref> <ref>PMID:9023343</ref> <ref>PMID:10720463</ref> <ref>PMID:14627716</ref>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_17604721}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 17604721 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pm9_consurf.spt"</scriptWhenChecked>
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    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_17604721}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pm9 ConSurf].
2PM9 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PM9 OCA].  
<div style="clear:both"></div>
 
== References ==
==Reference==
<references/>
Structure and organization of coat proteins in the COPII cage., Fath S, Mancias JD, Bi X, Goldberg J, Cell. 2007 Jun 29;129(7):1325-36. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17604721 17604721]
__TOC__
[[Category: Protein complex]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Bi, X.]]
[[Category: Bi X]]
[[Category: Fath, S.]]
[[Category: Fath S]]
[[Category: Goldberg, J.]]
[[Category: Goldberg J]]
[[Category: Mancias, J D.]]
[[Category: Mancias JD]]
[[Category: Beta propeller]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 01:23:53 2008''

Latest revision as of 09:10, 21 February 2024

Crystal structure of yeast Sec13/31 vertex element of the COPII vesicular coat

2pm9, resolution 3.30Å

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