1tuv: Difference between revisions

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{{Seed}}
[[Image:1tuv.png|left|200px]]


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==Crystal structure of YgiN in complex with menadione==
The line below this paragraph, containing "STRUCTURE_1tuv", creates the "Structure Box" on the page.
<StructureSection load='1tuv' size='340' side='right'caption='[[1tuv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1tuv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TUV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TUV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=VK3:MENADIONE'>VK3</scene></td></tr>
{{STRUCTURE_1tuv|  PDB=1tuv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuv OCA], [https://pdbe.org/1tuv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tuv RCSB], [https://www.ebi.ac.uk/pdbsum/1tuv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tuv ProSAT]</span></td></tr>
 
</table>
===Crystal structure of YgiN in complex with menadione===
== Function ==
 
[https://www.uniprot.org/uniprot/YGIN_ECOLI YGIN_ECOLI] Can oxidize menadiol to menadione.
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15613473}}, adds the Publication Abstract to the page
Check<jmol>
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  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tu/1tuv_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15613473}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1TUV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TUV OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tuv ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structural and biochemical evidence for an enzymatic quinone redox cycle in Escherichia coli: identification of a novel quinol monooxygenase., Adams MA, Jia Z, J Biol Chem. 2005 Mar 4;280(9):8358-63. Epub 2004 Dec 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15613473 15613473]
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Adams, M A.]]
[[Category: Adams MA]]
[[Category: Jia, Z.]]
[[Category: Jia Z]]
[[Category: Co-crystal with natural product]]
[[Category: Ferredoxin fold]]
[[Category: Menadione oxidase]]
[[Category: Monooxygenase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 02:37:34 2008''
Retrieved from "https://proteopedia.org/1tuv"