2f4f: Difference between revisions

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{{Seed}}
[[Image:2f4f.png|left|200px]]


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==Crystal structure of IS200 transposase==
The line below this paragraph, containing "STRUCTURE_2f4f", creates the "Structure Box" on the page.
<StructureSection load='2f4f' size='340' side='right'caption='[[2f4f]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2f4f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F4F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
{{STRUCTURE_2f4f|  PDB=2f4f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f4f OCA], [https://pdbe.org/2f4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f4f RCSB], [https://www.ebi.ac.uk/pdbsum/2f4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f4f ProSAT]</span></td></tr>
 
</table>
===Crystal structure of IS200 transposase===
== Function ==
 
[https://www.uniprot.org/uniprot/Q97Y68_SACS2 Q97Y68_SACS2]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16340015}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16340015 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/2f4f_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16340015}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2F4F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F4F OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f4f ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of a metal ion-bound IS200 transposase., Lee HH, Yoon JY, Kim HS, Kang JY, Kim KH, Kim DJ, Ha JY, Mikami B, Yoon HJ, Suh SW, J Biol Chem. 2006 Feb 17;281(7):4261-6. Epub 2005 Dec 11. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16340015 16340015]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Sulfolobus solfataricus]]
[[Category: Saccharolobus solfataricus]]
[[Category: Kang, J Y.]]
[[Category: Kang JY]]
[[Category: Kim, D J.]]
[[Category: Kim DJ]]
[[Category: Kim, H S.]]
[[Category: Kim HS]]
[[Category: Kim, K H.]]
[[Category: Kim KH]]
[[Category: Lee, H H.]]
[[Category: Lee HH]]
[[Category: Suh, S W.]]
[[Category: Suh SW]]
[[Category: Yoon, J Y.]]
[[Category: Yoon JY]]
[[Category: Mn complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 02:51:25 2008''
Retrieved from "https://proteopedia.org/2f4f"