2d3b: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2d3b.png|left|200px]]


<!--
==Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine==
The line below this paragraph, containing "STRUCTURE_2d3b", creates the "Structure Box" on the page.
<StructureSection load='2d3b' size='340' side='right'caption='[[2d3b]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2d3b]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D3B FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSL:(2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC+ACID'>MSL</scene></td></tr>
{{STRUCTURE_2d3b| PDB=2d3b |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d3b OCA], [https://pdbe.org/2d3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d3b RCSB], [https://www.ebi.ac.uk/pdbsum/2d3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d3b ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GLNA3_MAIZE GLNA3_MAIZE] Plays a role in the flow of nitrogen into nitrogenous organic compounds.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/2d3b_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d3b ConSurf].
<div style="clear:both"></div>


===Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine===
==See Also==
 
*[[Glutamine synthetase 3D structures|Glutamine synthetase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_16829528}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 16829528 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_16829528}}
 
==About this Structure==
2D3B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D3B OCA].
 
==Reference==
Atomic structure of plant glutamine synthetase: a key enzyme for plant productivity., Unno H, Uchida T, Sugawara H, Kurisu G, Sugiyama T, Yamaya T, Sakakibara H, Hase T, Kusunoki M, J Biol Chem. 2006 Sep 29;281(39):29287-96. Epub 2006 Jul 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16829528 16829528]
[[Category: Glutamate--ammonia ligase]]
[[Category: Single protein]]
[[Category: Zea mays]]
[[Category: Zea mays]]
[[Category: Hase, T.]]
[[Category: Hase T]]
[[Category: Kurisu, G.]]
[[Category: Kurisu G]]
[[Category: Kusunoki, M.]]
[[Category: Kusunoki M]]
[[Category: Sakakibara, H.]]
[[Category: Sakakibara H]]
[[Category: Sugawara, H.]]
[[Category: Sugawara H]]
[[Category: Sugiyama, T.]]
[[Category: Sugiyama T]]
[[Category: Uchida, T.]]
[[Category: Uchida T]]
[[Category: Unno, H.]]
[[Category: Unno H]]
[[Category: Yamaya, T.]]
[[Category: Yamaya T]]
[[Category: Glutamine synthetase maize]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 04:12:56 2008''
Retrieved from "https://proteopedia.org/2d3b"