2as9: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2as9.png|left|200px]]


<!--
==Functional and structural characterization of Spl proteases from staphylococcus aureus==
The line below this paragraph, containing "STRUCTURE_2as9", creates the "Structure Box" on the page.
<StructureSection load='2as9' size='340' side='right'caption='[[2as9]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2as9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AS9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2as9|  PDB=2as9  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2as9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2as9 OCA], [https://pdbe.org/2as9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2as9 RCSB], [https://www.ebi.ac.uk/pdbsum/2as9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2as9 ProSAT]</span></td></tr>
 
</table>
===Functional and structural characterization of Spl proteases from staphylococcus aureus===
== Function ==
 
[https://www.uniprot.org/uniprot/SPLC_STAA8 SPLC_STAA8]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16516230}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16516230 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/as/2as9_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16516230}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2AS9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AS9 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2as9 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Functional and structural characterization of Spl proteases from Staphylococcus aureus., Popowicz GM, Dubin G, Stec-Niemczyk J, Czarny A, Dubin A, Potempa J, Holak TA, J Mol Biol. 2006 Apr 21;358(1):270-9. Epub 2006 Feb 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16516230 16516230]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
[[Category: Czarny, A.]]
[[Category: Czarny A]]
[[Category: Dubin, A.]]
[[Category: Dubin A]]
[[Category: Dubin, G.]]
[[Category: Dubin G]]
[[Category: Holak, T A.]]
[[Category: Holak TA]]
[[Category: Popowicz, G M.]]
[[Category: Popowicz GM]]
[[Category: Potempa, J.]]
[[Category: Potempa J]]
[[Category: Stec-Niemczyk, J.]]
[[Category: Stec-Niemczyk J]]
[[Category: Serine protease]]
[[Category: Staphylococcus aureus]]
[[Category: Trypsin-like fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 07:09:24 2008''